alexeid

bacter

Bacterial phylogenetics in BEAST 2.

bayesian_phylo_lectures

Bayesian phylogenetics lecture slides: https://alexeid.github.io/bayesian_phylo_lectures

bdmm

Phylodynamics with Migration: A Computational Framework to Quantify Population Structure from Genomic Data

beast-graphics

Creating tree figures in the BEAST2 framework

Chain

Java package for basic handling of (phylogenetic) MCMC output files

climbing-grades

A Bayesian analysis of the climbing grade scale

combined-climbing

Data analysis of IFSC combined boulder and lead climbing events (olympic format)

toroidalDiffusion

An LPhy extension for toroidal diffusion models of evolution

TreeSpace

Musings on tree spaces

TreeStat2

A software package for computing statistics from tree files.

alexeid/bayesian_phylo_lectures

Bayesian phylogenetics lecture slides: https://alexeid.github.io/bayesian_phylo_lectures

alexeid/TreeSpace

Musings on tree spaces

alexeid/TreeStat2

A software package for computing statistics from tree files.

alexeid/climbing-grades

A Bayesian analysis of the climbing grade scale

alexeid/toroidalDiffusion

An LPhy extension for toroidal diffusion models of evolution

alexeid/bacter

Bacterial phylogenetics in BEAST 2.

alexeid/bdmm

Phylodynamics with Migration: A Computational Framework to Quantify Population Structure from Genomic Data

alexeid/beast-graphics

Creating tree figures in the BEAST2 framework

alexeid/Chain

Java package for basic handling of (phylogenetic) MCMC output files

alexeid/combined-climbing

Data analysis of IFSC combined boulder and lead climbing events (olympic format)

alexeid/fossilDating

A paper describing how to estimate fossil ages using Bayesian phylogenetic total evidence dating

alexeid/DensiTree

Automatically exported from code.google.com/p/densitree

alexeid/Molecular-clock-and-dating-of-phylogenies

alexeid/polygenicScore

Tools for calculating polygenicScore from 23andMe genotyping data

alexeid/sampled-ancestors