alexviiia
Statistical geneticist, computational biologist. Well-rounded nerd, also love languages and music.
Duke University. Prev @StoreyLab at Princeton UniversityDurham, NC
Pinned Repositories
BEDMatrix
A matrix-like wrapper around PLINK .bed files
cv
My academic CV LaTeX source files
DomStratStats
Improve protein domain predictions from HMMER3: Computes domain q-values and local FDRs, and tiered q-values (combining HMMER3 domain and sequence data).
dpuc2
Domain Prediction Using Context
dpuc2-data
Precomputed context networks that accompany the dpuc2 (Domain Prediction Using Context) project
filer
Handle Gzip'd Files Transparently
RandProt
Generate high-order Markov random protein sequences
simtrait
Simulate Complex Traits from Genotypes
bnpsd
R package to model and simulate admixed populations
popkin
R package to estimate kinship and FST from SNP data
alexviiia's Repositories
alexviiia/dpuc2
Domain Prediction Using Context
alexviiia/DomStratStats
Improve protein domain predictions from HMMER3: Computes domain q-values and local FDRs, and tiered q-values (combining HMMER3 domain and sequence data).
alexviiia/RandProt
Generate high-order Markov random protein sequences
alexviiia/cv
My academic CV LaTeX source files
alexviiia/filer
Handle Gzip'd Files Transparently
alexviiia/BEDMatrix
A matrix-like wrapper around PLINK .bed files
alexviiia/dpuc2-data
Precomputed context networks that accompany the dpuc2 (Domain Prediction Using Context) project
alexviiia/gcatest
genotype conditional association test
alexviiia/lfa
logistic factor analysis
alexviiia/Net-Ping-External
Cross-platform interface to ICMP "ping" utilities