/Fastqtrim

Primary LanguagePythonOtherNOASSERTION

#Trimmer for fastq files

A quick python script for trimming a specified number of bases from the beginning of each read in a fastq file.

###Usage

usage: python trimmer.py [-h] [-s START] [INPUT] [OUTPUT]

  • [-s START] trims all bases before this point from the alignment
  • [INPUT] file to be modified
  • [OUTPUT] defaults to stdout, file write not yet implemented