interpretable-cnn
Here you can find the codes and documentations regarding interpretable multichannel image analysis
Data structure
The images should be saved in h5 format. Each file should contain these keys:
image(16-bit np.array (h,w,c))mask(np.array (h,w,c), optional)label(str, optional)donor(str, optional)experiment(str, optional)channels(list, optional) Also, the name of the file should be the object number in the.ciffile