Pinned Repositories
3D-graph-ssl
Making self-supervised learning work on molecules by using their 3D geometry to pre-train GNNs. Implemented in DGL and Pytorch Geometric.
alphafold_pytorch
An implementation of the DeepMind's AlphaFold based on PyTorch for research
cmg-solver
Combinatorial Multigrid Solver for SDD Matrices
CorrectAndSmooth
dec
Effective-Resistance-Computation
fastGCN
GFlowNet-EM
Code for GFlowNet-EM, a novel algorithm for fitting latent variable models with compositional latents and an intractable true posterior.
glpe
graphium
Graphium: Scaling molecular GNNs to infinity.
alip67's Repositories
alip67/3D-graph-ssl
Making self-supervised learning work on molecules by using their 3D geometry to pre-train GNNs. Implemented in DGL and Pytorch Geometric.
alip67/alphafold_pytorch
An implementation of the DeepMind's AlphaFold based on PyTorch for research
alip67/cmg-solver
Combinatorial Multigrid Solver for SDD Matrices
alip67/CorrectAndSmooth
alip67/dec
alip67/Effective-Resistance-Computation
alip67/fastGCN
alip67/GFlowNet-EM
Code for GFlowNet-EM, a novel algorithm for fitting latent variable models with compositional latents and an intractable true posterior.
alip67/glpe
alip67/gnn-benchmark
Framework for evaluating Graph Neural Network models on semi-supervised node classification task
alip67/gnn-lspe
Source code for GNN-LSPE (Graph Neural Networks with Learnable Structural and Positional Representations)
alip67/GraphScoreMatching
Official implementation for the paper: Permutation Invariant Graph Generation via Score-Based Generative Modeling
alip67/graph-neural-pde
Continuous Diffusion Graph Neural Network
alip67/Non-Linear-Diffusion--Community-detection
alip67/Nonlinear_Diffusion
alip67/ogb
Benchmark datasets, data loaders, and evaluators for graph machine learning
alip67/openfold
Trainable PyTorch reproduction of AlphaFold 2
alip67/OptML_course
EPFL Course - Optimization for Machine Learning - CS-439
alip67/sdae
alip67/SignNet-BasisNet
alip67/spectral-modification
Spectral Modification of Graphs
alip67/stats-110
alip67/torchgfn
GFlowNet library