allen-cell-animated

Pinned Repositories

abm-initialization-collection
Collection of tasks for initializing ABM simulations
Language:Python2 4 20
agave
Language:C++41 6 997
cell-abm-pipeline
Simulation, analysis, and visualization workflows for cell-scale agent-based models
Language:Python2 4 31
cell-feature-explorer
Language:TypeScript2 3 970
io-collection
Collection of tasks for I/O
Language:Python1 4 00
MolSimUnity
a simulation framework for molecular modeling in Unity
Language:C#30
nbvv
Jupyter notebook extension for volume-viewer
Language:Python7 5 60
timelapse-colorizer
A web-based, time-series visualizer for tracked segmented data.
Language:TypeScript10 3 2821
volume-viewer
Language:TypeScript93 10 837
website-3d-cell-viewer
Language:TypeScript5 2 1514

allen-cell-animated's Repositories

allen-cell-animated/volume-viewer
Language:TypeScript93 10 837
allen-cell-animated/agave
Language:C++41 6 997
allen-cell-animated/timelapse-colorizer
A web-based, time-series visualizer for tracked segmented data.
Language:TypeScript10 3 2821
allen-cell-animated/nbvv
Jupyter notebook extension for volume-viewer
Language:Python7 5 60
allen-cell-animated/website-3d-cell-viewer
Language:TypeScript5 2 1514
allen-cell-animated/abm-initialization-collection
Collection of tasks for initializing ABM simulations
Language:Python2 4 20
allen-cell-animated/cell-abm-pipeline
Simulation, analysis, and visualization workflows for cell-scale agent-based models
Language:Python2 4 31
allen-cell-animated/cell-feature-explorer
Language:TypeScript2 3 970
allen-cell-animated/abm-colony-collection
Collection of tasks for analyzing colony dynamics
Language:Python1
allen-cell-animated/abm-shape-collection
Collection of tasks for analyzing cell shapes
Language:Python1 4 0
allen-cell-animated/cell-line-catalog
Language:HTML10
allen-cell-animated/CellVRUnity
Unity project for VR applications
Language:C#1 4 1
allen-cell-animated/colorizer-data
example scripts and utilities for preparing data for the time series colorizer app
Language:Python1 7 240
allen-cell-animated/io-collection
Collection of tasks for I/O
Language:Python1 4 00
allen-cell-animated/allencell-nav-bar
Language:JavaScript
allen-cell-animated/base-react-redux-app
Language:TypeScript2
allen-cell-animated/cell-catalog
Cell catalog 2.0 [beta]
Language:TypeScript
allen-cell-animated/cell-feature-data
This repo handles validating, processing and uploading CFE datasets
Language:JavaScript2 37
allen-cell-animated/cellbrowser-tools
Language:Python3 3
allen-cell-animated/deepzoom_demo
Language:JavaScript
allen-cell-animated/github-boilerplate
2 1
allen-cell-animated/MiTOSSis
Unity Project for the MiTOSSis VR game
Language:C#7 0
allen-cell-animated/node-project-actions
Language:JavaScript4 0
allen-cell-animated/on-boarding
Language:Python1
allen-cell-animated/render-style-transfer
Language:Jupyter Notebook6 0
allen-cell-animated/threejs-cell-test
Language:HTML3 0
allen-cell-animated/visual-essay-framework
Language:TypeScript
allen-cell-animated/visual-essay-integrated-mitotic-cell
The Integrated Mitotic Stem Cell is a data driven model and visualization tool that captures a holistic view of human cell division. This model transforms microscopy images of 15 individual organelles into an integrated representation of the undifferentiated human induced pluripotent stem cell (hIPSC) at each major stage of mitosis.
Language:TypeScript2 0
allen-cell-animated/website-3d-cell-viewer-release
4 0
allen-cell-animated/wetzel
Generate Markdown documentation from JSON Schema
Language:JavaScript0 0