Pinned Repositories
ANANSE
Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed installation instructions and usage examples.
awesome-expectations
Examples of great academic lab expectations, manuals, policies for joining and being in the lab
awesome-obsidian
🕶️ Awesome stuff for Obsidian
awesome-R
A curated list of awesome R packages, frameworks and software.
bioinformatics-100-days
Learn and practice the bioinformatics skills in 100 Days.
compbio-gists
Computational Biology & Bioinformatics Resources
Cytometry-R-scripts
R scripts to help with your flow cytometry analysis
DashboardPlusPlus
Demonstrating the Dashboard++ method of organizing a vault in Obsidian
datascience-box
Data Science Course in a Box
getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics and data science
allisonvmitch's Repositories
allisonvmitch/getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics and data science
allisonvmitch/ANANSE
Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed installation instructions and usage examples.
allisonvmitch/awesome-obsidian
🕶️ Awesome stuff for Obsidian
allisonvmitch/awesome-R
A curated list of awesome R packages, frameworks and software.
allisonvmitch/compbio-gists
Computational Biology & Bioinformatics Resources
allisonvmitch/Cytometry-R-scripts
R scripts to help with your flow cytometry analysis
allisonvmitch/DashboardPlusPlus
Demonstrating the Dashboard++ method of organizing a vault in Obsidian
allisonvmitch/depmap
Cancer Dependency Map package
allisonvmitch/depmap-crispr-vs-rnai
allisonvmitch/getting-started
Getting started with Docker
allisonvmitch/ggplot2_workshop
Material for "Drawing Anything with ggplot2" workshop
allisonvmitch/github-slideshow
A robot powered training repository :robot:
allisonvmitch/gnomeR
Package to wrangle and visualize genomic data in R
allisonvmitch/labcode
scripts for regular analysis
allisonvmitch/markdown-portfolio
allisonvmitch/ml-genomics-resources
Machine Learning for Genomics and Therapeutics Resources (Cell Patterns)
allisonvmitch/obsidian-day-planner
An Obsidian plugin for day planning and managing pomodoro timers from a task list in a Markdown note.
allisonvmitch/Pipeliner
An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.
allisonvmitch/pydata-book
Materials and IPython notebooks for "Python for Data Analysis" by Wes McKinney, published by O'Reilly Media
allisonvmitch/R_stuff
allisonvmitch/readingpapers
A guide to reading scientific papers
allisonvmitch/RNA-seq_notes
A continually expanding collection of RNA-seq tools
allisonvmitch/scRNA-seq_online
allisonvmitch/sra-tools
SRA Tools
allisonvmitch/stat_rethinking_2022
Statistical Rethinking course winter 2022
allisonvmitch/Tools
Tools created by CCBR/NCBR members
allisonvmitch/Tools4RR
Materials for a one-credit course on reproducible research
allisonvmitch/uc-r.github.io
Main repository for R programming courses @ University of Cincinnati, courses and tutorials that focus on data wrangling, exploration, visualization, and analysis with R.
allisonvmitch/workflowr
Organize your project into a research website
allisonvmitch/workshop-tidyverse
Workshop: Using R/tidyverse to analyze & visualize processed genomics data!