Pinned Repositories
binder-chemminer
chemical similarity integrated into metabolic network
bioinfo-conf
Bioinformatics conferences and activities
blast-course-jupyterlab
implementation of alperyilmaz/blast-course in jupyterlab for binder access
blogdown-hugo
my personal website
BYM4591-book
Contents of book used in BYM4591 Data Analysis and Visualization Course at YTU
data-analysis-binder-r-python
binder config for data-analysis-and-visualization lecture
dav-exercises
Exercise questions submitted by Data Analysis and Visualization with R course students at YTU
jupyterlab-bioinformatics
Jupyter notebooks for introductory level bioinformatics
tidyverse-keras
Tidyverse from Rocker and Keras
ytu-yz-yaz
YTU Yapay Zeka Yaz Okulu Ders notları
alperyilmaz's Repositories
alperyilmaz/jupyterlab-bioinformatics
Jupyter notebooks for introductory level bioinformatics
alperyilmaz/blast-course-jupyterlab
implementation of alperyilmaz/blast-course in jupyterlab for binder access
alperyilmaz/dav-exercises
Exercise questions submitted by Data Analysis and Visualization with R course students at YTU
alperyilmaz/alperyilmaz.github.io
Personal website and blog
alperyilmaz/asciidoctor
Asciidoctor container
alperyilmaz/BaselRBootcamp_2018April
Materials for the 2018 April BaselRBootcamp
alperyilmaz/binder-metacoder
metacoder running on jupyter
alperyilmaz/blast-course
A primer for using BLAST in command line
alperyilmaz/conda-rnftools
Dockerized rnftools
alperyilmaz/conda-snakemake-gatk
snakemake pipeline for gatk running on binder
alperyilmaz/dav-assignments
Assignment contents for Data Analysis and Visualization course
alperyilmaz/dna2vec
(dockerized) dna2vec: Consistent vector representations of variable-length k-mers
alperyilmaz/drawio-charts
vector graphics drawn and saved by draw.io
alperyilmaz/examples
A collection of examples introducing to Nextflow scripting
alperyilmaz/exercise-test
alperyilmaz/gganimate
A Grammar of Animated Graphics
alperyilmaz/gpu-keras-rstudio
Dockerfile
alperyilmaz/gviz-on-docker
genome track visualizations with gviz on docker
alperyilmaz/icgc-featurecounts
A Nextflow pipeline to run featureCounts on RNAseq BAM files on ICGC in AWS/AWS Batch
alperyilmaz/jupyterlab-repo2docker
This repo will be used to generate jupyterlab container that matches binder versions used by other jupyterlab repos
alperyilmaz/kallisto-nf
A nextflow implementation of Kallisto & Sleuth RNA-Seq Tools
alperyilmaz/katacoda-scenarios
Katacoda Scenarios
alperyilmaz/learnxinyminutes-docs
Code documentation written as code! How novel and totally my idea!
alperyilmaz/nextflow-rnaseq
amazon aws batch implementation of nextflow/rnaseq-encode-nf tutorial
alperyilmaz/patchwork
All the Git-it Workshop completers!
alperyilmaz/r-data-vis
Repo for course materials to be used with BYM4591 Data Analysis and Visualization at YTU
alperyilmaz/RTutorials
Repository for tutorials made
alperyilmaz/test-course
alperyilmaz/tidy-text-mining
Manuscript of the book "Tidy Text Mining with R" by Julia Silge and David Robinson
alperyilmaz/verse-gviz
rocker-verse container with Bioconductor Gviz