| Tool | Version | Singularity |
|---|---|---|
| aegean | 0.15.1 | Singularity |
| augustus | 3.3.1 | Singularity |
| blast+ | 2.7.1 | Singularity |
| bowtie | 2.3.4.1 | Singularity |
| busco | 3.0.2 | Singularity |
| cdhit | 4.6.8 | Singularity |
| fastqc | 0.11.7 | Singularity |
| gawk | 4.2.1 | Singularity |
| genometools | 1.5.9 | Singularity |
| gmap | 2018_03_25 | Singularity |
| kentutils | 364 | Singularity |
| Mash | 2.0 | Singularity |
| minimap | 2.10 | Singularity |
| nanoplot | 1.13.0 | Singularity |
| qiime | 1.9.1 | Singularity |
| RSEM | 1.3.0 | Singularity |
| sequenceserver | 1.0.11 | Singularity |
| sratoolkit | 2.9.0 | Singularity |
| STAR | 2.6.0a | Singularity |
| transdecoder | 5.3.0 | Singularity |
| trimgalore | 0.4.5 | Singularity |
| trinity | 2.6.6 | Singularity |
| xlsx2csv | 0.7.3 | Singularity |