amanzadi
Machine Learning researcher. Deep learning for drug discovery and development. Interested in Artificial Life.
Stockholm, Sweden
Pinned Repositories
ADMETlab
A platform for systematic ADME evaluation of drug molecules, thereby accelerating the drug discovery process.
alphafold
Open source code for AlphaFold.
amanzadi
Config files for my GitHub profile.
amanzadi.github.io
A lightweight and easy-to-use website template.
ATM-ML
awesome-glyco
Community-curated list of software packages and data resources for Glycoscience
chemicalx
A PyTorch and TorchDrug based deep learning library for drug pair scoring. (KDD 2022)
decagon
Graph convolutional neural network for multirelational link prediction
DeepDTA
MS_Thesis
Application of Graph Neural Networks in accurate prediction of polypharmacy side effects.
amanzadi's Repositories
amanzadi/awesome-glyco
Community-curated list of software packages and data resources for Glycoscience
amanzadi/MS_Thesis
Application of Graph Neural Networks in accurate prediction of polypharmacy side effects.
amanzadi/ADMETlab
A platform for systematic ADME evaluation of drug molecules, thereby accelerating the drug discovery process.
amanzadi/alphafold
Open source code for AlphaFold.
amanzadi/amanzadi
Config files for my GitHub profile.
amanzadi/amanzadi.github.io
A lightweight and easy-to-use website template.
amanzadi/ATM-ML
amanzadi/chemicalx
A PyTorch and TorchDrug based deep learning library for drug pair scoring. (KDD 2022)
amanzadi/decagon
Graph convolutional neural network for multirelational link prediction
amanzadi/DeepDTA
amanzadi/diffab
✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
amanzadi/DSOL_rv0.2
deep protein solubility prediction
amanzadi/gflownet
Generative Flow Networks
amanzadi/graph_coattention
Work on designing a graph co-attention algorithm.
amanzadi/GraphDTA
GraphDTA: Predicting drug-target binding affinity with graph neural networks
amanzadi/keras-molecules
Autoencoder network for learning a continuous representation of molecular structures.
amanzadi/making-it-rain
Cloud-based molecular simulations for everyone
amanzadi/pre-training-via-denoising
Official implementation of pre-training via denoising for TorchMD-NET
amanzadi/PSE
An easy-to-use Deep Learning tool for Polypharmacy Side Effect prediction.
amanzadi/sagenet
Spatial reconstruction of dissociated single-cell data
amanzadi/TDC
Therapeutics Data Commons: Machine Learning Datasets for Therapeutics
amanzadi/TxGNN
TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design
amanzadi/VoIP
Personal linux base VoIP system based on Asterisk