amarquand/PCNtoolkit

Issues

• Age variable as a separate covariate along with the B-spline basis

  #218 opened 3 months ago by adavidBlancoUPF
  0

• Speed up HBR for python==3.11

  #216 opened 3 months ago by AuguB
  0

• Speed up HBR for python==3.12

  #215 opened 3 months ago by AuguB
  1

• Pymc version 5.13 breaks HBR

  #213 opened 3 months ago by AuguB
  1

• A problem with scipy version

  #206 opened 7 months ago by wangzhe73
  3

• Odd metrics from normative.estimate

  #205 opened 8 months ago by MattFill
  3

• question regarding normative trajectory GPR

  #201 opened 8 months ago by HSweatman
  3

• Implement GPR

  #180 opened 8 months ago by likeajumprope
  0

• Change the BSpline implementation to the Scipy one

  #204 opened 8 months ago by AuguB
  0

• Move the transfer tutorial to the Demo repo

  #203 opened 8 months ago by AuguB
  0

• Change the directory within the NormConf object

  #202 opened 8 months ago by AuguB
  0

• Make the '_samples' nodes in the computation graph separate leaf nodes, and only sample them in quantiles

  #200 opened 9 months ago by AuguB
  0

• Question about the Z-scores calculated from estimate() and predict() when using HBR

  #199 opened 10 months ago by YCHuang0610
  4

• Compute epistemic uncertainty for quantiles

  #198 opened 10 months ago by AuguB
  0

• Try normative parallel script

  #197 opened 10 months ago by AuguB
  1

• save/load needs to store regconf for each responsevar

  #196 opened a year ago by AuguB
  0

• Improve to_dict and from_dict methods

  #194 opened a year ago by AuguB
  0

• Pass freedom parameter to param again

  #195 opened a year ago by AuguB
  0

• Add SHASH likelihood

  #184 opened a year ago by AuguB
  0

• HBR Normative Modelling

  #179 opened a year ago by eliauk07yz
  0

• Implement GPR

  #193 opened a year ago by AuguB
  0

• Implement BLR

  #174 opened a year ago by AuguB
  0

• Write quantiles function for HBR

  #191 opened a year ago by AuguB
  0

• Write evaluation functions and remove corresponding abstract methods

  #192 opened a year ago by AuguB
  0

• Setter for save_dir and log_dir

  #190 opened a year ago by AuguB
  0

• Make separate (standalone) modules for each of the model types

  #173 opened a year ago by AuguB
  0

• Make paths in normative_model_dict.json relative

  #188 opened a year ago by AuguB
  0

• write more extensive tests for HBR fit, predict, transfer

  #186 opened a year ago by AuguB
  0

• map sigma and delta to positive numbers

  #187 opened a year ago by AuguB
  0

• Create CLI

  #185 opened a year ago by AuguB
  0

• Embed the data scaling (for inputs and outputs) in the normative model classes

  #189 opened a year ago by AuguB
  0

• Implement NormHBR

  #177 opened a year ago by AuguB
  0

• Start refactor with class skeleton

  #172 opened a year ago by AuguB
  0

• Factorize posterior

  #182 opened a year ago by AuguB
  0

• finish fit, predict, transfer for HBR

  #181 opened a year ago by AuguB
  0

• Implement HBR

  #176 opened a year ago by AuguB
  0

• Implement NormData and HBRData

  #183 opened a year ago by AuguB
  0

• Re-write toolkit

  #178 opened a year ago by AuguB
  0

• Implement NormBLR

  #175 opened a year ago by AuguB
  0

• Testing Demo Notebooks -Long NM

  #157 opened a year ago by likeajumprope
  0

• Release version 0.29

  #162 opened a year ago by AuguB
  1

• Testing Demo Notebooks - HBR SHASH

  #156 opened a year ago by likeajumprope
  4

• Testing Demo Books - BLR protocol -removing pcntoolkit version dependency

  #153 opened a year ago by likeajumprope
  1

• Testing Demo Notebooks - braincharts - yeo17.ipynb

  #163 opened a year ago by likeajumprope
  0

• Testing Demo Notebooks -braincharts - sa.ipynb

  #159 opened a year ago by likeajumprope
  1

• Testing Demo Notebooks - braincharts - ct.ipynb

  #158 opened a year ago by likeajumprope
  0

• Testing Demo Notebooks - HBR Fcon

  #155 opened a year ago by likeajumprope
  5

• Testing Demo Books - CPC protocol

  #154 opened a year ago by likeajumprope
  1

• Make UML of the toolkit

  #161 opened a year ago by AuguB
  0

• Testing Demo Notebooks - braincharts - smith10.ipynb

  #160 opened a year ago by likeajumprope
  1