amdreamer

3dfmAnalysis

Superfine Lab Matlab analysis code

bw

github-help

Chinese translation of the Github Help(https://help.github.com/index.html) and the other article collection. 《Github 帮助文档》 中文翻译（包含了官方文档以及其他文章）。

Intro-to-ChIPseq

Intro to ChIPseq using HPC

keras-attention-mechanism

Attention mechanism Implementation for Keras.

Machine-Learning-Programs

This include some classical machine learning scripts including CNN for cv and RNN for NLP.

mikado

Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to select the best models in each locus.

Programs-for-bioinformatics

Some home-made programs for computational biology analysis.

Project1

protein_feature_analysis

ProteinFeatureAnalyzer extracts, analyzes and visualizes features from protein structures.

amdreamer/Machine-Learning-Programs

This include some classical machine learning scripts including CNN for cv and RNN for NLP.

amdreamer/Programs-for-bioinformatics

Some home-made programs for computational biology analysis.

amdreamer/3dfmAnalysis

Superfine Lab Matlab analysis code

amdreamer/bw

amdreamer/github-help

Chinese translation of the Github Help(https://help.github.com/index.html) and the other article collection. 《Github 帮助文档》 中文翻译（包含了官方文档以及其他文章）。

amdreamer/Intro-to-ChIPseq

Intro to ChIPseq using HPC

amdreamer/keras-attention-mechanism

Attention mechanism Implementation for Keras.

amdreamer/mikado

Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to select the best models in each locus.

amdreamer/Project1

amdreamer/protein_feature_analysis

ProteinFeatureAnalyzer extracts, analyzes and visualizes features from protein structures.

amdreamer/DNA-Sequence-Assembly

I made a simplified version of the DNA sequence assembly problem assembling a sequence of fragments into a coherent genetic code of an entire organism. When given a collection of two or more overlapping DNA fragments I align and merge these fragments by choosing the best matches at each step with the goal of ending with a single longer sequence of the fragment.

amdreamer/snli-entailment

attention model for entailment on SNLI corpus implemented in Tensorflow and Keras

amdreamer/spp-idr

Wrappers around NGS peak callers to both call peaks and run IDR

amdreamer/Visualizing-and-Understanding-Neural-Models-in-NLP

amdreamer/wwang_bioinfo_tools