amin-nejat
I'm a Flatiron Research Fellow. I'm interested in ML, stats, dynamical systems, and computational neuroscience.
Flatiron InstituteNew York, NY
Pinned Repositories
CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
CELL_ID
C-elegans Cell Identifier
deformable-atlas
Implementation of deformable atlas construction based on differentiable grid sampling and probabilistic programming
fcf
Methods for estimating functional and interventional connectivity from time series data.
Probabilistic-Modeling-of-Neural-Data
Workshop series on probabilistic programming targeted for neuroscientists
RRWOC
Robust Regression Without Correspondences
sinkhorn-em
Probabilistic Segmentation and Labeling of C. elegans Neurons Using Sinkhorn Expectation Maximization Algorithm
stat-atlas
Statistical Atlas of C. elegans Neurons
wishart-process
Estimating Noise Correlations in Neural Populations with Wishart Processes
NeuroPAL_ID
Research software for (semi-) automated detection and identification of neurons in images of NeuroPAL, extract ID’d neural activity traces from NeuroPAL;GCaMP animals, and upload these datasets to public repositories. DOI: 10.1016/j.cell.2020.12.012
amin-nejat's Repositories
amin-nejat/CELL_ID
C-elegans Cell Identifier
amin-nejat/sinkhorn-em
Probabilistic Segmentation and Labeling of C. elegans Neurons Using Sinkhorn Expectation Maximization Algorithm
amin-nejat/fcf
Methods for estimating functional and interventional connectivity from time series data.
amin-nejat/RRWOC
Robust Regression Without Correspondences
amin-nejat/deformable-atlas
Implementation of deformable atlas construction based on differentiable grid sampling and probabilistic programming
amin-nejat/Probabilistic-Modeling-of-Neural-Data
Workshop series on probabilistic programming targeted for neuroscientists
amin-nejat/stat-atlas
Statistical Atlas of C. elegans Neurons
amin-nejat/CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
amin-nejat/homepage
amin-nejat/LFP-Cluster
Analyzing LFP Signals to Cluster V1 Neurons
amin-nejat/netrep
Some methods for comparing network representations in deep learning and neuroscience.
amin-nejat/ssm
Bayesian learning and inference for state space models