andand

KTH Royal Institute of TechnologyStockholm, Sweden

Pinned Repositories

DEGEPRIME
A program for degenerate primer design for broad taxonomic-range PCR for microbial ecology studies
Language:Perl9 4 111
DUALPRIME
Dual-genome primer design for construction of DNA microarrays
Language:Perl1 1 01
metassemble
Scripts to run several metagenomics assembly programs
Language:Shell01
sbdi-gtdb
Files for the SBDI Sativa curated GTDB 16S sequence files
0 0 00
CONCOCT
Clustering cONtigs with COverage and ComposiTion
Language:Python124 8 22648
sbdi-gtdb
Files for the SBDI Sativa curated GTDB 16S sequence files
Language:Perl4 3 11
LabProtocols
The Environmental Genomic Group also does lab work. This is how we do it.
12 11 16
POGENOM
Population genomics from metagenomes
Language:Perl11 4 164
toolbox
Various scripts used at the EnvGen group, directed towards metagenomic analysis.
Language:Python14 9 12
ampliseq
Amplicon sequencing analysis workflow using DADA2 and QIIME2
Language:Nextflow187 151 346117

andand's Repositories

andand/DEGEPRIME
A program for degenerate primer design for broad taxonomic-range PCR for microbial ecology studies
Language:Perl9 4 111
andand/DUALPRIME
Dual-genome primer design for construction of DNA microarrays
Language:Perl1 1 01
andand/metassemble
Scripts to run several metagenomics assembly programs
Language:Shell01
andand/sbdi-gtdb
Files for the SBDI Sativa curated GTDB 16S sequence files
0 0 00