Data analysis supporting publication:
Guertin, M.J., Markowetz, F. and Holding, A.N., 2017. Novel Quantitative ChIP-seq Methods Measure Absolute Fold-Change in ER Binding Upon Fulvestrant Treatment. bioRxiv, p.182261.
Files >100mb not included.
For key examples https://github.com/andrewholding/Brundle_Example/
For R package see Brundle. https://github.com/andrewholding/Brundle
To reproduce figures in manuscript view Manuscript_Figures.Rmd