andrewsu
Professor at Scripps Research studying bioinformatics, genetics, and genomics; he/him
Scripps Research
Pinned Repositories
2012-11-scripps
Software Carpentry repository for Scripps, Nov 15-16 2012
ABCB
Applied Bioinformatics and Computational Biology class at TSRI
abcb-2025-test
abcb-git-test
abcb-test
academictree
Applied-Bioinformatics
Student course material for the Applied Bioinformatics course at Scripps Research
Applied-Bioinformatics_Homeworks
biomedical-graph-visualizer
Biomedical Graph Visualizer (BGV)
SunsetCam
andrewsu's Repositories
andrewsu/abcb-2025-test
andrewsu/abcb-git-test
andrewsu/abcb-test
andrewsu/academictree
andrewsu/Benchmarks
andrewsu/biolink-model
Schema and generated objects for biolink data model and upper ontology
andrewsu/mentorship-survey-analysis
andrewsu/biothings_explorer
TRAPI service for BioThings Explorer
andrewsu/BTE_metakg_viz
andrewsu/cellxgene
An interactive explorer for single-cell transcriptomics data
andrewsu/DrugMechDB
A database of paths that represent the mechanism of action from a drug to a disease in an indication.
andrewsu/frink-data-lake-analysis
andrewsu/information-resource-registry
The information resource registry is a listing of data sources present in the NCATS Data Translator system. Each information resource has an identifier, a short description, and an URL to more information about that resource.
andrewsu/lab-website-template-docs
GitBook documentation for Lab Website Template
andrewsu/langchain-test
andrewsu/ontogpt
LLM-based ontological extraction tools, including SPIRES
andrewsu/openai_topic_classification
andrewsu/recount3
Explore and download data from the recount3 project
andrewsu/repoDB
andrewsu/rstudio_test
test integration with RStudio
andrewsu/RTX
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
andrewsu/ScriptShare
A repository for some simple tools that we want to share.
andrewsu/su_openai_dev
andrewsu/TACT
For voting on two-month release cycle items
andrewsu/test_pages
andrewsu/TISSUES
andrewsu/TranslatorArchitecture
andrewsu/TranslatorTechnicalDocumentation
Official Developer Documentation repository for the Biomedical Data Translator
andrewsu/Updated-DrugMAP-Parser
This parser creates an array of JSON objects of drug-enzyme mappings with associated reference details.
andrewsu/wdsub
Wikidata Subsetting