angelica-varesi

Pinned Repositories

• pySCENIC

  pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.

  Language:Python45918547184

• SoupX

  R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data

  Language:R263614837

• too-many-cells

  Cluster single cells and analyze cell clade relationships with colorful visualizations.

  Language:Haskell10635218

• metacells

  Metacells - Single-cell RNA Sequencing Analysis

  Language:Python986718

angelica-varesi's Repositories