Pinned Repositories
parseR
parseR: Pipeline for rna-seq analysis in R
rseqR
An R-based pipeline to analyse RNA-seq data. This pipeline performs quality control of reads, generates gene and transcript level counts, performs differential analysis, and gene pathway enrichment analyses.
snpR
R-based tools to deal with SNP data and data from the GWAS catalog
chompR
An R-based pipeline to analyse chromatin modification high throughput sequencing data. This pipeline performs quality control of reads, performs peak-calling, differential peak-calling, and pathway enrichment analyses.
fiddleR
Functions to manipulate files and directories directly from R
juggleR
Collection of functions that help with easily manipulating data.frames and managing files from within R.
anilchalisey's Repositories
anilchalisey/rseqR
An R-based pipeline to analyse RNA-seq data. This pipeline performs quality control of reads, generates gene and transcript level counts, performs differential analysis, and gene pathway enrichment analyses.
anilchalisey/fiddleR
Functions to manipulate files and directories directly from R
anilchalisey/chompR
An R-based pipeline to analyse chromatin modification high throughput sequencing data. This pipeline performs quality control of reads, performs peak-calling, differential peak-calling, and pathway enrichment analyses.
anilchalisey/juggleR
Collection of functions that help with easily manipulating data.frames and managing files from within R.
anilchalisey/snpR
R-based tools to deal with SNP data and data from the GWAS catalog
anilchalisey/parseR
parseR: Pipeline for rna-seq analysis in R