/usegalaxy-eu-tools

List of tools included in https://usegalaxy.eu

Primary LanguagePythonMIT LicenseMIT

UseGalaxy tools

There are a couple separate lists of tools contained here. The sum total of them make up the set of tools installed in UseGalaxy.eu

File Tools
asaim
epigenetics
graphclust
metabolomics
tools_galaxyp Proteomics Tools
tools_iuc Most of the tools maintained by IUC. We aren't currently planning on automatically adding all the tools from IUC but we may reconsider this later.
tools Tools not contained in one of the other files.

Installation

export PATH=/usr/local/tools/_conda/bin/:$PATH
source activate ephemeris
shed-tools install -t tools.yaml -a $GALAXY_API_KEY --galaxy https://galaxy.uni-freiburg.de

Install of a Single Tool

shed-tools install -a $GALAXY_API_KEY --galaxy https://galaxy.uni-freiburg.de --name annotatemyids --owner iuc --section_label 'Annotation'