Maven, Java
mvn clean package
- Path to DNA sequences input file
- Temporary path for intermediate files
- Output path for final destination files
- (Optional) Motif Length. Default is 8.
haddop jar target/median-motif-search-1.0-SNAPSHOT.jar MedianStringMotifSearchMapReduce /input/path/hdfs/ /tmp/path/hdfs/ output/path/hdfs <motif length>