anniewest
PhD. Microbial Ecology (she/her) Postdoctoral Research Fellow in the Environmental Metagenomics team at Genomics Aotearoa.
https://genomicsaotearoa.github.ioUniversity of Auckland
Pinned Repositories
Gut-microbiota-of-the-threatened-takahe-biogeographic-patterns-and-conservation-implications
Comparative gut bacterial community analysis in the threatened Aotearoa New Zealand takahē.
Kakapo-cloacitis-omics
Metagenomic and metatranscriptomic analyses of kākāpō with active exudative cloacitis (against healthy controls).
myfirstpipeline
My first nf-core pipeline GA
PhD-thesis-statistical-analyses
Bioinformatics pipelines for microbial amplicon sequence data (demultiplexed, paired-end reads) generated from gut microbial communities of Aotearoa New Zealand kākāpō and takahē.
The-mycobiota-of-faeces-from-the-critically-endangered-kakapo-and-associated-nest-litter
Statistical analyses for the manuscript: The mycobiota of faeces from the critically endangered kakapo and associated nest litter
wrangling-genomics
Data Wrangling and Processing for Genomics
inStrain
Bioinformatics program inStrain
anniewest's Repositories
anniewest/Gut-microbiota-of-the-threatened-takahe-biogeographic-patterns-and-conservation-implications
Comparative gut bacterial community analysis in the threatened Aotearoa New Zealand takahē.
anniewest/Kakapo-cloacitis-omics
Metagenomic and metatranscriptomic analyses of kākāpō with active exudative cloacitis (against healthy controls).
anniewest/myfirstpipeline
My first nf-core pipeline GA
anniewest/PhD-thesis-statistical-analyses
Bioinformatics pipelines for microbial amplicon sequence data (demultiplexed, paired-end reads) generated from gut microbial communities of Aotearoa New Zealand kākāpō and takahē.
anniewest/The-mycobiota-of-faeces-from-the-critically-endangered-kakapo-and-associated-nest-litter
Statistical analyses for the manuscript: The mycobiota of faeces from the critically endangered kakapo and associated nest litter
anniewest/wrangling-genomics
Data Wrangling and Processing for Genomics