Pinned Repositories
AI-Descartes
Open source package for accelerated symbolic discovery of fundamental laws.
April6th-binder-conda
awesome-cheatsheets
👩💻👨💻 Awesome cheatsheets for popular programming languages, frameworks and development tools. They include everything you should know in one single file.
awesome-nextflow
A curated list of nextflow based pipelines
binder_r_conda
Binder for R
Bioinformatics-with-Python-Cookbook-third-edition
Bioinformatics with Python Cookbook, Third Edition
BMI8130-copy
chip-nf
An automated ChIP-seq pipeline using Nextfow
Master_Bioinformatics_UVIC
Additional Material for Master in Bioinformatics and Omics Data Analysis
antoniojperezcastro's Repositories
antoniojperezcastro/BMI8130-copy
antoniojperezcastro/Master_Bioinformatics_UVIC
Additional Material for Master in Bioinformatics and Omics Data Analysis
antoniojperezcastro/AI-Descartes
Open source package for accelerated symbolic discovery of fundamental laws.
antoniojperezcastro/April6th-binder-conda
antoniojperezcastro/awesome-cheatsheets
👩💻👨💻 Awesome cheatsheets for popular programming languages, frameworks and development tools. They include everything you should know in one single file.
antoniojperezcastro/awesome-nextflow
A curated list of nextflow based pipelines
antoniojperezcastro/binder_r_conda
Binder for R
antoniojperezcastro/Bioinformatics-with-Python-Cookbook-third-edition
Bioinformatics with Python Cookbook, Third Edition
antoniojperezcastro/chip-nf
An automated ChIP-seq pipeline using Nextfow
antoniojperezcastro/ChIP-seq-analysis
ChIP-seq analysis notes from Ming Tang
antoniojperezcastro/epigenomics_uvic
Teaching material
antoniojperezcastro/Epigenomics_uvic.Task1
antoniojperezcastro/Foundations2023OurStory
An example git repository for the UCI Short Course Foundations in Systems Biology
antoniojperezcastro/freeCodeCamp
freeCodeCamp.org's open-source codebase and curriculum. Learn to code for free.
antoniojperezcastro/FSC2021_TheRaven
antoniojperezcastro/gatk
Official code repository for GATK versions 4 and up
antoniojperezcastro/ggsashimi-from-guigolab
Command-line tool for the visualization of splicing events across multiple samples
antoniojperezcastro/git_HandsOn
a public repository to play with remote git for the UVIC master's in omics
antoniojperezcastro/handson-ml2
A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.
antoniojperezcastro/MSc_Omics_Uvic_MachineLearning
Material for then Applications course on Machine Learning for the MSc in Omics Data Analysis of the University of Vic (UVic)
antoniojperezcastro/nextflow
A DSL for data-driven computational pipelines
antoniojperezcastro/nucleotide_percentage
phyton script that calculates % of nucleotides in a DNA or RNA sequence
antoniojperezcastro/numpy-tutorial
antoniojperezcastro/Numpy-Tutorial-SciPyConf-2019
Numpy-Tutorial-SciPyConf-2019
antoniojperezcastro/pandas-plink
PLINK reader for Python.
antoniojperezcastro/pysam
Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.
antoniojperezcastro/pysb
Python framework for Systems Biology modeling
antoniojperezcastro/r-conda
R and RStudio via conda packages in repo2docker
antoniojperezcastro/scipy-lecture-notes
Tutorial material on the scientific Python ecosystem
antoniojperezcastro/single-cell-best-practices
This project is work in progress! https://www.sc-best-practices.org