Pinned Repositories
bamstats
Create BAM summary , using PCAP bam_stats, samtools.
bi-collect
bioconda-recipes
Conda recipes for the bioconda channel.
challenge-seeds
docker-sra-toolkit
dropbox_paper_scripts
ecsub
command-line tool to run batch computing tasks on Amazon Web Services (AWS).
ecsub-doc-ja
sequeeze
Based on seqtk. https://github.com/lh3/seqtk
module_box_aokad
repository for sharing dsub(ecsub)-based module
aokad's Repositories
aokad/ecsub
command-line tool to run batch computing tasks on Amazon Web Services (AWS).
aokad/sequeeze
Based on seqtk. https://github.com/lh3/seqtk
aokad/bi-collect
aokad/bioconda-recipes
Conda recipes for the bioconda channel.
aokad/challenge-seeds
aokad/docker-sra-toolkit
aokad/dropbox_paper_scripts
aokad/ecsub-doc-ja
aokad/ecsub2qsub
aokad/els_utils
Elastic Search Utitily
aokad/fusion_utils
utility for comparing fusion results
aokad/fusionfusion
script for detecting fusion genes from several transcript alignment tools
aokad/gcatworkflow_ganttly
Plot gantt chart from GCATWorkflowCloud logs.
aokad/genomon2-dockerfile
aokad/GenomonPostAnalysis
Genomonが作成した結果ファイルを整形します
aokad/GenomonSV
structure detection program
aokad/hap_utils
Utilities for haplotype analysis
aokad/igvjs_auto_capture
aokad/iravnet
intron retention associated variant detection project
aokad/minimal
Minimal is a Jekyll theme for GitHub Pages
aokad/module_box_aokad
repository for sharing dsub(ecsub)-based module
aokad/nanomonsv
SV detection tool for nanopore sequence reads
aokad/ob_utils
aokad/onebreak
national cancer center break point
aokad/otomo
On-premises GCAT Workflow Job Manager
aokad/paplot
paplot creates various dynamic and interactive reports for cancer genome analysis.
aokad/paplot-doc_JP
paplot-docの日本語化プロジェクト
aokad/redash
Make Your Company Data Driven. Connect to any data source, easily visualize, dashboard and share your data.
aokad/simulation_lr_sv
aokad/wordcount
ecsub example module