/sedtrap

Files associated with the USGS GoM Sediment Trap (GMT cruises)

Primary LanguageR

sedtrap

Files associated with the USGS GoM Sediment Trap (GMT cruises). A study examining sedimentation rates and biogeochemical influences on microbial communities.

  • Project title: Characterizing the Biodiversity and Variability of the Biological Carbon Pump in the Northern Gulf of Mexico Supported by NOAA's Northern Gulf Institute

The structure of this repository is:

  • markdown- study questions, sample descriptions (including a metadata table for R analysis), analysis notes, and results
  • figures – pre-publication versions of figures
  • metadata – sample metadata and other metadata, prepared for database submission
  • notebooks – Jupyter notebooks for data analysis and figure generation
  • tourmaline – link to Tourmaline output for 16S and 18S-ITS rRNA datasets, and metadata/manifest files required for running Tourmaline