Pinned Repositories
CNMF_E
Constrained Nonnegative Matrix Factorization for microEndoscopic data
eks
Ensembling and kalman smoothing for pose estimation
fastplotlib
Next-gen fast plotting library running on WGPU using the pygfx rendering engine
ffn
Flood-Filling Networks for instance segmentation in 3d volumes.
funimag
Compression, denoising and demixing of functional imaging recordings
jnormcorre
Jax implementation of normcorre
LocalAggregation
Tensorflow implementation for "Local Aggregation for Unsupervised Learning of Visual Embeddings"
localmd
Accelerated local matrix decomposition for calcium imaging data
masknmf
Method for separating overlapping calcium imaging signals
napari-masknmf
napari plugin for viewing and analyzing neuroimaging data (calcium, voltage, etc.)
apasarkar's Repositories
apasarkar/jnormcorre
Jax implementation of normcorre
apasarkar/masknmf
Method for separating overlapping calcium imaging signals
apasarkar/napari-masknmf
napari plugin for viewing and analyzing neuroimaging data (calcium, voltage, etc.)
apasarkar/CNMF_E
Constrained Nonnegative Matrix Factorization for microEndoscopic data
apasarkar/eks
Ensembling and kalman smoothing for pose estimation
apasarkar/fastplotlib
Next-gen fast plotting library running on WGPU using the pygfx rendering engine
apasarkar/ffn
Flood-Filling Networks for instance segmentation in 3d volumes.
apasarkar/funimag
Compression, denoising and demixing of functional imaging recordings
apasarkar/LocalAggregation
Tensorflow implementation for "Local Aggregation for Unsupervised Learning of Visual Embeddings"
apasarkar/localmd
Accelerated local matrix decomposition for calcium imaging data
apasarkar/masknmf_full_pipeline
End to end pipeline for maskNMF, from motion correction to demixing
apasarkar/neurocaas
IaC codebase for the NeuroCAAS Platform
apasarkar/masknmf-toolbox
Tools for motion correcting, compressing, demixing and visualizing single cell functional imaging data
apasarkar/neurocaas_contrib
Repo to help develop on AMIs associated with NeuroCAAS
apasarkar/noise2self
A framework for blind denoising with self-supervision.
apasarkar/pytorch_sparse
PyTorch Extension Library of Optimized Autograd Sparse Matrix Operations
apasarkar/rlocalnmf
New localNMF implementation with advanced background models and initialization options
apasarkar/Test