Pinned Repositories
bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
bcftools
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
bioconda-recipes
Conda recipes for the bioconda channel.
BreaKmer
A method to identify structural variation from sequencing data in target regions
cagt
Automatically exported from code.google.com/p/cagt
deepTools
Tools to process and analyze deep sequencing data.
Duplex-Sequencing
DWGSIM
Whole Genome Simulator for Next-Generation Sequencing
EQGRP
Decrypted content of eqgrp-auction-file.tar.xz
MISO
MISO: Mixture of Isoforms model for RNA-Seq isoform quantitation
apastore's Repositories
apastore/bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
apastore/bcftools
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
apastore/bioconda-recipes
Conda recipes for the bioconda channel.
apastore/BreaKmer
A method to identify structural variation from sequencing data in target regions
apastore/cagt
Automatically exported from code.google.com/p/cagt
apastore/deepTools
Tools to process and analyze deep sequencing data.
apastore/Duplex-Sequencing
apastore/DWGSIM
Whole Genome Simulator for Next-Generation Sequencing
apastore/EQGRP
Decrypted content of eqgrp-auction-file.tar.xz
apastore/MISO
MISO: Mixture of Isoforms model for RNA-Seq isoform quantitation
apastore/vcf2maf
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
apastore/VEP_plugins
Plugins for the Ensembl Variant Effect Predictor (VEP)