Pinned Repositories
cancer-genomics-workflow
MGI's CWL Cancer Pipelines.
docker-annotsv
Docker container for running AnnotSV
docker-apaul7-analysis
personal docker image used for interactive genome data analysis
docker-BayesTyper
Docker image for running BayesTyper from https://github.com/bioinformatics-centre/BayesTyper
docker-bcftools
Docker container for bcftools
docker-bcftools-cwl
Variant of bcftools image without an ENTRYPOINT
docker-CADD
docker-cellranger
docker-cnvpytor
docker-deepmosaic
apaul7's Repositories
apaul7/cancer-genomics-workflow
MGI's CWL Cancer Pipelines.
apaul7/docker-annotsv
Docker container for running AnnotSV
apaul7/docker-apaul7-analysis
personal docker image used for interactive genome data analysis
apaul7/docker-bcftools
Docker container for bcftools
apaul7/docker-bcftools-cwl
Variant of bcftools image without an ENTRYPOINT
apaul7/docker-CADD
apaul7/docker-cellranger
apaul7/docker-cnvpytor
apaul7/docker-deepmosaic
apaul7/docker-drop
dockerfile for creating an image to run drop(https://github.com/gagneurlab/drop)
apaul7/docker-duphold
docker image for running duphold
apaul7/docker-expansion-hunter
Dockerfile for creating Docker image to run Expansion Hunter
apaul7/docker-expansion-hunter-denovo
Dockerfile for creating Docker image to run Expansion Hunter Denovo
apaul7/docker-fiberseq-tools
apaul7/docker-HipSTR
apaul7/docker-leafcutter
apaul7/docker-manta_somatic-cwl
apaul7/docker-nextflow
apaul7/docker-pacbio-conda
docker image for running analysis on PacBio data
apaul7/docker-pigz
apaul7/docker-scallele
apaul7/docker-splice-ai
Dockerfile for creating Docker image to run SpliceAI
apaul7/docker-squirls
apaul7/docker-sv2
Docker image for running SV2 from https://github.com/dantaki/SV2
apaul7/docker-xtea
apaul7/drop
Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders
apaul7/merge-sv-records
apaul7/samplot
Plot structural variant signals from many BAMs and CRAMs
apaul7/svviz2
for visual evaluation of read support for structural variation
apaul7/tools