apeterson91/Bioinformatics

Coursera Algorithms for Bioinformatics

My code and notes to follow along the Coursera Course. The course is separated into 6 Chapters, as are my book exercises notes:

Chapter 1: Where in the Genome does replication begin?

Chapter 2: How do we Sequence Antibiotics?

* Branch and Bound Algorithm

Chapter 3: Which DNA patterns play the role of molecular clocks?

* Greedy Motif Search
* Randomized Algorithm
* Gibbs Sampling Algorithm

Chapter 4: How do we Assemble Genomes?

* Graph Search

Chapter 5: How do we compare Biological Sequences?

Chapter 6: Are there fragile regions in the Human Genome?