Pinned Repositories
aritra90.github.io
Webpage Repo
CluStrat
Structure informed clustering based population structure correction strategy
COGG
This repository contains instructions to run the method, COGG or Correlation Optimization of Genetics and Geodemographics.
fermikit
De novo assembly based variant calling pipeline for Illumina short reads
networkx-quick-start
From DataFrame to Network Graph
TeraPCA
TeraPCA is a multithreaded C++ software suite based on Intel's MKL library (or any other BLAS and/or LAPACK distribution). TeraPCA features no dependencies to external libraries and combines the robustness of subspace iteration with the power of randomization.
ThreSPCA
A Fast, Provably Accurate Approximation Algorithm for Sparse Principal Component Analysis
Geno4SD
An python omics data toolkit for the analysis across biological scales
SimRA
SimRA (Simulation based on Random-graphs Algorithms) is a framework for simulating generic and complex evolutionary scenarios of multiple populations with subdivision and admixture. The algorithm generates a network structure, called Ancestral Recombination Graph (ARG), that models coalescence and genetic exchange events (recombinations) with SNP as well as STR polymorphisms.
GLSearch
GLSearch: Maximum Common Subgraph Detection via Learning to Search
aritra90's Repositories
aritra90/TeraPCA
TeraPCA is a multithreaded C++ software suite based on Intel's MKL library (or any other BLAS and/or LAPACK distribution). TeraPCA features no dependencies to external libraries and combines the robustness of subspace iteration with the power of randomization.
aritra90/CluStrat
Structure informed clustering based population structure correction strategy
aritra90/ThreSPCA
A Fast, Provably Accurate Approximation Algorithm for Sparse Principal Component Analysis
aritra90/aritra90.github.io
Webpage Repo
aritra90/COGG
This repository contains instructions to run the method, COGG or Correlation Optimization of Genetics and Geodemographics.
aritra90/fermikit
De novo assembly based variant calling pipeline for Illumina short reads
aritra90/networkx-quick-start
From DataFrame to Network Graph