arjanvandervelde

bamtools

C++ API & command-line toolkit for working with BAM data

BBB

bedtools2

bedtools - the swiss army knife for genome arithmetic

cfn-include

Preprocessor for CloudFormation templates with support for loops and flexible include statements

bedtools

A powerful toolset for genome arithmetic.

bamtools

C++ API & command-line toolkit for working with BAM data

snakemake

This is the development home of the workflow management system Snakemake. For general information, see

libzdock

ZDOCK predictions and PDB structures in C++ and Python

stateregexp

extract genomic regions from segmentation using regular expression

TwoBit

Reader / Writer for UCSC 2-bit Genome Format

arjanvandervelde/bamtools

C++ API & command-line toolkit for working with BAM data

arjanvandervelde/BBB

arjanvandervelde/bedtools2

bedtools - the swiss army knife for genome arithmetic

arjanvandervelde/cfn-include

Preprocessor for CloudFormation templates with support for loops and flexible include statements

arjanvandervelde/cfpack

A CLI tool that helps to build CloudFormation template using multiple smaller templates.

arjanvandervelde/jruby

JRuby, an implementation of Ruby on the JVM

arjanvandervelde/libxcorr

Cross Correlation function for C using FFTW

arjanvandervelde/macports-ports

The MacPorts ports tree

arjanvandervelde/pssh

Parallel SSH Tools

arjanvandervelde/Quicksilver

Quicksilver Project Source

arjanvandervelde/redlock-py

Redis distributed locks in Python

arjanvandervelde/sflowtool

Print binary sFlow feed to ASCII, or forward it to other collectors.

arjanvandervelde/TwoBit

2-bit reader in C++, reads .2bit formatted sequence data

arjanvandervelde/vim-airline

lean & mean status/tabline for vim that's light as air

arjanvandervelde/xgboost

Scalable, Portable and Distributed Gradient Boosting (GBDT, GBRT or GBM) Library, for Python, R, Java, Scala, C++ and more. Runs on single machine, Hadoop, Spark, Flink and DataFlow