arovai's Stars
gbarisano/alps
Bash script to compute DTI-ALPS
FCP-INDI/C-PAC
Configurable Pipeline for the Analysis of Connectomes
nroduit/Weasis
Weasis is a DICOM viewer available as a desktop application or as a web-based application.
ln2t/connectomix
BIDS app to compute resting-stage connectomes
ln2t/nipystats
nilearn-based BIDS app for task-based fMRI data analysis (first and second level)
awesome-selfhosted/awesome-selfhosted
A list of Free Software network services and web applications which can be hosted on your own servers
schorschii/QuickSync4Linux
Upload/download files, backup/sync contacts and communicate with your Gigaset devices
naveau/qspacesampling2GE
abhogal-lab/seeVR
Toolbox for analyzing cerebrovascular imaging data based on BOLD MRI
ln2t/cvrmap-paper
Jupyter notebook to generate the figures in the cvrmap paper
compneuro-ncu/fmridenoise
Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.
nilearn/nilearn
Machine learning for NeuroImaging in Python
openneuropet/PET2BIDS
PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sheets -- paper @JOSS https://doi.org/10.21105/joss.06067
ln2t/cvrmap
CVRmap - A Bids App to compute Cerebrovascular Maps from fMRI data
nipy/quickshear
Quickshear Defacing for Neuroimages
wtclarke/spec2nii
Multi-format in vivo MR spectroscopy conversion to NIFTI
bbfrederick/rapidtide
rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
datalad/datalad-container
DataLad extension for containerized environments
arielletambini/denoiser
Nuisance removal tool for fMRI data
cbinyu/pydeface
BIDS App wrapper for Pydeface
maartenmennes/ICA-AROMA
ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
G-Node/gogs
Fork of Gogs (https://github.com/gogs/gogs) "a painless self-hosted Git service" with added features for research data management
raamana/visualqc
VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
Ablinne/kolorcontrol
Simple GUI front-end to xcalib
datalad/datalad
Keep code, data, containers under control with git and git-annex
UNFmontreal/Dcm2Bids
Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
OpenSourcePhysics/tracker
Video analysis and modeling tool built on the Open Source Physics framework
janaka/Gy521-Dev-Kit
Some tools that aid projects utilising the GY521 breakout board (MPU5060 chip)
chenkonturek/MRS_MRI_libs
Contains libraries for reading, writing and analysing Magnetic Resonance Spectroscopy and Imaging (MRS & MRI) data.
vsoch/som-orthanc
A Docker base for running Orthanc for the School of Medicine