Pinned Repositories
amr_curation
A public repository for collective curation of antimicrobial resistance (AMR) genes and mutations. Submit, discuss, and resolve AMR curation issues.
aro
The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of an antibiotic
asm_microbe_2019_rgi
This repository is for RGI - ASM Microbe 2019 poster
CARPDM
Comprehensive Antibiotic Resistance Probe Design Machine (CARPDM)
FAQ
Frequently asked questions for CARD, RGI, and ARO
mobio
The Mobilome Ontology describes bacterial mobile genetic elements, their mechanisms, and associated epidemiology.
rgi
Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.
rgi-viz
RGI visualization
rgi_database_builder
Galaxy data manager for RGI
state-of-the-card-2021
State of the CARD 2021 Presentations & Demonstrations, view recorded lectures, overview, and walkthroughs.
arpcard's Repositories
arpcard/rgi
Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.
arpcard/amr_curation
A public repository for collective curation of antimicrobial resistance (AMR) genes and mutations. Submit, discuss, and resolve AMR curation issues.
arpcard/aro
The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of an antibiotic
arpcard/state-of-the-card-2021
State of the CARD 2021 Presentations & Demonstrations, view recorded lectures, overview, and walkthroughs.
arpcard/mobio
The Mobilome Ontology describes bacterial mobile genetic elements, their mechanisms, and associated epidemiology.
arpcard/FAQ
Frequently asked questions for CARD, RGI, and ARO
arpcard/rgi-viz
RGI visualization
arpcard/rgi_database_builder
Galaxy data manager for RGI
arpcard/asm_microbe_2019_rgi
This repository is for RGI - ASM Microbe 2019 poster
arpcard/card-live-dashboard
arpcard/broadstreet_schema
The Broad Street schema is the underlying SQL structure of the Comprehensive Antibiotic Resistance Database
arpcard/viro
CARD's draft Virulence Ontology (VIRO) describing bacterial virulence
arpcard/CARD-ARCS
CARD ARCS
arpcard/alphafold
Open source code for AlphaFold.
arpcard/misc
Contains miscellaneous scripts
arpcard/rgi_wrapper
RGI galaxy project wrapper