artur-sannikov
I am a PhD student at the University of Turku, Finland, interested in bioinformatics, data analysis, and automation.
University of TurkuTurku, Finland
Pinned Repositories
100-days-of-code
Fork this template for the 100 days journal - to keep yourself accountable (multiple languages available)
100-plus-Python-programming-exercises-extended
100+ python programming exercise problem discussed ,explained and solved in different ways
aarhus-internship-code
A collection of notebooks, scripts, csv files, and environment files for my internship at Aarhus University
Analyzing-CIA-Factbook-Data-Using-SQL
Analysis of the CIA Factbook that contains information on world's states and territories
Answering-Business-Questions-using-SQL
The project is based on the Guided Project: Answering Business Questions using SQL on Dataqeust
caddy-ansible
Ansible repository to bootstrap Caddy with Crowdsec support
history-of-video-games
HoloFoodR
R interface for HoloFood resource
scraping-blackwells-bookshop
weather-forecast-bot-on-Telegram
This is a Telegram bot that will send you daily weather forecast and will remind you to bring and umbrella if it's rainy
artur-sannikov's Repositories
artur-sannikov/caddy-ansible
Ansible repository to bootstrap Caddy with Crowdsec support
artur-sannikov/HoloFoodR
R interface for HoloFood resource
artur-sannikov/dotfiles
artur-sannikov/home-manager
My Nix Home Manager configuration
artur-sannikov/homelab-scripts
Miscellaneous scripts I use to run my self-hosted services
artur-sannikov/IntegratedLearner
Integrated Machine Learning for Multi-omics Classification and Prediction
artur-sannikov/local-quadlets
Podman Quadlets I use on local computers
artur-sannikov/MGnifyR
R package for searching, downloading and analysis of EBI MGnify metagenomics data
artur-sannikov/mia
Microbiome analysis
artur-sannikov/miaTime
Microbiome time series analysis
artur-sannikov/miaViz
Microbiome Analysis Plotting and Visualization
artur-sannikov/mixedCCA
R package for sparse canonical correlation analysis with mixed data types (continuous, binary, zero-truncated)
artur-sannikov/my-paper
Quarto template for the Journal of Statistical Software
artur-sannikov/NetCoMi
Network construction, analysis, and comparison for microbial compositional data
artur-sannikov/nix-quarto
artur-sannikov/nix-vscode-extensions
Nix expressions for VSCode and OpenVSX extensions [maintainers: @deemp, @AmeerTaweel]
artur-sannikov/nixos
My NixOS and Home Manager configuration
artur-sannikov/nixpkgs
Nix Packages collection & NixOS
artur-sannikov/OMA
Orchestrating Microbiome Analysis
artur-sannikov/oma-cachix
Nix cache for Orchestrating Microbiome Analysis book
artur-sannikov/outreach
Publications, slides, and posters
artur-sannikov/packer-proxmox
My Packer templates for Proxmox
artur-sannikov/packer-proxmox-debian-12-bookworm-template
Packer setup creating a Debian 12 template VM on a Proxmox server
artur-sannikov/podlet
Generate Podman Quadlet files from a Podman command, compose file, or existing object
artur-sannikov/scater
Clone of the Bioconductor repository for the scater package.
artur-sannikov/serverless-dns
The RethinkDNS resolver that deploys to Cloudflare Workers, Deno Deploy, Fastly, and Fly.io
artur-sannikov/shadow-nix
Supporting Shadow under NixOS, fork of the @NicolasGuilloux work
artur-sannikov/SpiecEasi
Sparse InversE Covariance estimation for Ecological Association and Statistical Inference
artur-sannikov/SPRING
Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data
artur-sannikov/Stirling-PDF
locally hosted web application that allows you to perform various operations on PDF files