aryehjc

Bioinformatics researcher and Python enthusiast, Currently learning C++ and R.

Pinned Repositories

gff_strand_statistics
Program to output basic statistics on count of positive/negative strands for genome annotation .gff files
Language:Python00
GlycanApplication2022_Version3
Version 3 of Glycan Application (now 2023)
Language:HTML00
Locate-Insertion-Regions
Find possible phage insertion sites in genome assembly when given start and end point of MUMMer alignment files in bp
Language:Python00
MummerAlignmentToDataframe_2023
Mummer Alignment To Dataframe for graphing in Matplotlib
Language:Python00
proteomics-scripts
Creating scripts to optimize proteomics workflows.
Language:Shell00
UpSetR
An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..
Language:R753152
Roary
Rapid large-scale prokaryote pan genome analysis
Language:Perl314189
pharokka
fast phage annotation program
Language:Python14413

aryehjc/Locate-Insertion-Regions
Find possible phage insertion sites in genome assembly when given start and end point of MUMMer alignment files in bp
Language:Python
aryehjc/proteomics-scripts
Creating scripts to optimize proteomics workflows.
Language:Shell
aryehjc/gff_strand_statistics
Program to output basic statistics on count of positive/negative strands for genome annotation .gff files
Language:Python
aryehjc/MummerAlignmentToDataframe_2023
Mummer Alignment To Dataframe for graphing in Matplotlib
Language:Python
aryehjc/GlycanApplication2022_Version3
Version 3 of Glycan Application (now 2023)
Language:HTML