Pinned Repositories
alphafold-analyser
A tool to visualise the results of AlphaFold2 and inspect the quality of structural predictions
alphafold-pdb_mmcif_download-on-hpc
alphafold pdb_mmcif_download on hpc without error
AlphaFold3
Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
ashishportfolio
coderigor
Code Rigor and Reproducibility with R
D-SCRIPT
A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions
esm-fold
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
fairseq
Facebook AI Research Sequence-to-Sequence Toolkit written in Python.
fasta-sequence-extractor
Script to extract a specified number of FASTA sequences from a multi-FASTA file.
frontend-virtuartlity-ashish-6am
ashishfeb13's Repositories
ashishfeb13/alphafold-analyser
A tool to visualise the results of AlphaFold2 and inspect the quality of structural predictions
ashishfeb13/alphafold-pdb_mmcif_download-on-hpc
alphafold pdb_mmcif_download on hpc without error
ashishfeb13/AlphaFold3
Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
ashishfeb13/ashishportfolio
ashishfeb13/coderigor
Code Rigor and Reproducibility with R
ashishfeb13/D-SCRIPT
A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions
ashishfeb13/esm-fold
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
ashishfeb13/fairseq
Facebook AI Research Sequence-to-Sequence Toolkit written in Python.
ashishfeb13/fasta-sequence-extractor
Script to extract a specified number of FASTA sequences from a multi-FASTA file.
ashishfeb13/frontend-virtuartlity-ashish-6am
ashishfeb13/landingpage
website landing page coding bootcamp 17 June 2020
ashishfeb13/MetaVelvet
An extension of Velvet assembler to de novo metagenome assembly from short sequence reads
ashishfeb13/one-liners
Useful bash one-liners for bioinformatics.
ashishfeb13/openfold-copy2024
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
ashishfeb13/pdb2pqr
PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.
ashishfeb13/portfolio-2020
Ashish portfolio coding bootcamp
ashishfeb13/ProFET
ProFET: Protein Feature Engineering Toolkit for Machine Learning
ashishfeb13/script-toChek-GTP-Sample-output-After-Prompts-and-output-PERCENTAGE
The script reads an input file and counts the occurrences of each keyword in a case-insensitive manner. It then calculates the percentage of each keyword and saves the results to an output file. Additionally, it generates a pie chart showing the percentage distribution of the keywords.
ashishfeb13/SpatialPPI
ashishfeb13/test1
ashishfeb13/vegue
ashishfeb13/virtuartlity
ashishfeb13/virtuartlity2
virtuartlity2 final project
ashishfeb13/VirtuARTlity_frontend-2
Frontend code for Virtuartlity