ashuein
I work in the area of Computational Biology and Mathematical modelling as a PhD student. Writing codes and watching computers obey you is an awesome experience
Indian Institute of Technology, New DelhiNew Delhi, India
Pinned Repositories
500-AI-Machine-learning-Deep-learning-Computer-vision-NLP-Projects-with-code
500 AI Machine learning Deep learning Computer vision NLP Projects with code
awesome-deep-learning
A curated list of awesome Deep Learning tutorials, projects and communities.
awesome-math
A curated list of awesome mathematics resources
awesome-network-analysis
A curated list of awesome network analysis resources.
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
biotools
A list of useful bioinformatics resources
choose
A human-friendly and fast alternative to cut and (sometimes) awk
Cluster_Ensembles
A package for combining multiple partitions into a consolidated clustering. The combinatorial optimization problem of obtaining such a consensus clustering is reformulated in terms of approximation algorithms for graph or hyper-graph partitioning.
ClusterEnsembles
A Python package for cluster ensembles
dgl
Python package built to ease deep learning on graph, on top of existing DL frameworks.
ashuein's Repositories
ashuein/CirGO
ashuein/onelinerizer
Convert any Python 2 file into a single line of code
ashuein/Genomic-Interactive-Visualization-Engine
Genomic Interactive Visualization Engine
ashuein/graph-compare-panel
This plugin is built as a panel plugin that combines and contrasts different time shifts on the same panel
ashuein/tutmom
Tutorial on "Modern Optimization Methods in Python"
ashuein/PyFolding
Python framework for multi-parameter optimization and model evaluation
ashuein/graphframes
ashuein/meld
Modeling with limited data
ashuein/optimization-tutorial
Simple framework for modeling optimization problems in Python
ashuein/cello
Genetic circuit design automation
ashuein/GraphKernels
A package for computing Graph Kernels
ashuein/protein-interaction-network
Computes a molecular graph for protein structures.
ashuein/goenrich
GO enrichment with python -- pandas meets networkx
ashuein/MPI-Bash
Parallel version of the Bash shell
ashuein/assessing_diversity_in_multiplex_networks
Assessing Diversity in Multiplex Networks - Codes and Examples
ashuein/Py3plex
Py3Plex - A multilayer complex network visualization and analysis library in python3
ashuein/matplotlib
matplotlib: plotting with Python
ashuein/getcontacts
Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation
ashuein/toolbox
Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)
ashuein/graph-representation-learning
Autoencoders for Unsupervised Link Prediction and Semi-Supervised Node Classification (DSAA 2018)
ashuein/rstudio-panda
tmTheme file and font file for Panda syntax dark version for RStudio
ashuein/scholar.py
A parser for Google Scholar, written in Python
ashuein/dgl
Python package built to ease deep learning on graph, on top of existing DL frameworks.
ashuein/OptiCon
A general framework for systematic and de novo identification of synergistic key regulators.
ashuein/SuperNoder-v1.0
ashuein/stellargraph
Machine Learning on Graphs
ashuein/Diffuse2Direct
Orientation of the protein-protein interaction network using network diffusion techniques
ashuein/awesome-network-embedding
A curated list of network embedding techniques.
ashuein/ngless
NGLess: NGS with less work
ashuein/Camoco
Camoco is a fully-fledged software package for building co-expression networks and analyzing the overlap interactions among genes.