Pinned Repositories
atabeyunlu
Overview page
atabeyunlu.github.io
Personal website for Atabey Ünlü.
beautiful-jekyll
✨ Build a beautiful and simple website in literally minutes. Demo at https://beautifuljekyll.com
CMI
Competition Workspace for Kaggle's CMI Problematic Internet Use
CROssBAR-BioCypher-Migration
This is a repo for migration of CROssBAR data to the Neo4j database via BioCypher
CROssBAR-Data-Process
CROssBAR v2 GraphDB Data Process
Prot2Mol
Target based molecule generation using protein embeddings and SELFIES molecule representation
DEEPScreen2
Automated Tool for Drug-Target Interaction Prediction Using Deep Convolutional Neural Networks
DrugGEN
Official implementation of DrugGEN: Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Adversarial Networks
SELFormer
SELFormer: Molecular Representation Learning via SELFIES Language Models
atabeyunlu's Repositories
atabeyunlu/atabeyunlu
Overview page
atabeyunlu/atabeyunlu.github.io
Personal website for Atabey Ünlü.
atabeyunlu/beautiful-jekyll
✨ Build a beautiful and simple website in literally minutes. Demo at https://beautifuljekyll.com
atabeyunlu/CMI
Competition Workspace for Kaggle's CMI Problematic Internet Use
atabeyunlu/CROssBAR-BioCypher-Migration
This is a repo for migration of CROssBAR data to the Neo4j database via BioCypher
atabeyunlu/CROssBAR-Data-Process
CROssBAR v2 GraphDB Data Process
atabeyunlu/DEEPScreen
DEEPScreen: Virtual Screening with Deep Convolutional Neural Networks Using Compound Images
atabeyunlu/DEEPScreen2
atabeyunlu/DrugGEN
DrugGEN model
atabeyunlu/esm-nuc
atabeyunlu/Prot2Mol
Target based molecule generation using protein embeddings and SELFIES molecule representation
atabeyunlu/pypath
Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotations and intercellular communication roles.
atabeyunlu/image-a-mol
What if you can represent molecules as image?
atabeyunlu/Prot2Mol_HU
Target based molecule generation using protein embeddings and SELFIES molecule representation
atabeyunlu/qlora-fine-tune
atabeyunlu/Reducer
You want dimension reduction for your data? This is the right place!
atabeyunlu/RhoFold
Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach
atabeyunlu/SELFIES-Transformer
SELFIES-Transformer: Learning the Representation of Chemical Space for Discovering New Drugs using Transformers Architecture
atabeyunlu/Uni-Mol
Official Repository for the Uni-Mol Series Methods
atabeyunlu/ZubyNet-PyTorch
PyTorch implementation of ZubyNet.