athowes/naomi-aghq

Issues

• Analyze input of parameters to Naomi outputs

  #33 opened 2 years ago by athowes
  0

• Crashing using `tmb$obj` for new version

  #50 opened 9 months ago by athowes
  0

• Try PCA-AGHQ for epilepsy example

  #47 opened 9 months ago by athowes
  0

• First draft of paper and appendix

  #55 opened a year ago by athowes
  1

• Naomi outputs generated incorrectly by `adam` bug

  #28 opened 2 years ago by athowes
  1

• Check polynomial times Gaussian structure

  #59 opened a year ago by athowes
  0

• Run inference for Naomi modules separately

  #52 opened a year ago by athowes
  0

• Automated skewness detection

  #54 opened a year ago by athowes
  0

• Comparison report using MMD

  #42 opened 2 years ago by athowes
  0

• Coverage assessment using PIT histograms and ECDF difference plots

  #43 opened 2 years ago by athowes
  0

• Run `aghq` `s > 8` on cluster

  #34 opened 2 years ago by athowes
  2

• Run `k = 5` options for `aghq`

  #39 opened 2 years ago by athowes
  0

• Comparison report using PSIS

  #41 opened 2 years ago by athowes
  0

• Test random mixture model

  #15 opened 3 years ago by athowes
  0

• Faster matrix algebra for Laplace marginals

  #23 opened 2 years ago by athowes
  0

• Design and evaluation of new grids

  #58 opened a year ago by athowes
  3

• StatML retreat poster

  #57 opened a year ago by athowes
  0

• Posterior contraction assessment

  #45 opened a year ago by athowes
  1

• Finish off astronomy example

  #46 opened a year ago by athowes
  2

• Use e.g. Anderson-Darling test rather than Kolmogorov-Smirnov

  #51 opened a year ago by athowes
  1

• Generate samples from hyperparameters for `TMB`, `aghq` and `adam`

  #32 opened a year ago by athowes
  0

• Write a compartmental model in TMB

  #14 opened a year ago by athowes
  1

• Write some version of `multi-agyw` as TMB template

  #21 opened a year ago by athowes
  4

• Create presentation for MLGH

  #40 opened a year ago by athowes
  0

• Add method for comparison of two KS test results

  #31 opened a year ago by athowes
  0

• Move point estimates out of contraction

  #56 opened a year ago by athowes
  0

• Explore or write-up possibility of parallelising

  #53 opened a year ago by athowes
  0

• Exceedance probabilites case-study

  #35 opened a year ago by athowes
  1

• Create poster for BioInference

  #36 opened a year ago by athowes
  0

• Put MCMC diagnostics into appendix

  #48 opened a year ago by athowes
  0

• Add PCA plots to main text

  #49 opened a year ago by athowes
  0

• Create presentation for Turing

  #37 opened 2 years ago by athowes
  0

• Check `TMB` matches `aghq` with `k = 1`

  #44 opened 2 years ago by athowes
  0

• Check hyper marginals from `tmbstan`

  #38 opened 2 years ago by athowes
  0

• Laplace marginals development

  #20 opened 2 years ago by athowes
  0

• Standard deviation better estimated by `TMB` than `aghq` bug

  #27 opened 2 years ago by athowes
  1

• Scale up the number of grid points

  #22 opened 2 years ago by athowes
  2

• Add inference comparisons on Naomi output

  #24 opened 2 years ago by athowes
  2

• Strange KS value of 1 in `lambda_t1_out`

  #30 opened 2 years ago by athowes
  0

• Add ESS for Naomi output

  #29 opened 2 years ago by athowes
  0

• Solve puzzle with `TMB` estimating some standard deviations better

  #26 opened 2 years ago by athowes
  0

• Prepare presentation for lab group 11/04

  #25 opened 2 years ago by athowes
  0

• Complete poster for BayesComp

  #19 opened 2 years ago by athowes
  0

• Add latent field to comparison output

  #11 opened 2 years ago by athowes
  2

• Run simulations on cluster whilst using orderly

  #8 opened 2 years ago by athowes
  2

• Complete full Laplace implementation and understanding

  #16 opened 2 years ago by athowes
  0

• Better ways to compare the posterior output

  #12 opened 2 years ago by athowes
  7

• Select second case study model

  #10 opened 2 years ago by athowes
  1

• Set-up simulations

  #9 opened 3 years ago by athowes
  2

• Write all the TMB models into a single one using flags?

  #7 opened 3 years ago by athowes
  1