Tolias Lab

Pinned Repositories

atflow
TensorFlow library for Andreas Tolias lab
Language:Python2 4 32
attorch
PyTorch Utilities
Language:Python2 10 114
commons
DataJoint schemas for neuroscience data
Language:MATLAB1 13 028
cov-est
Covariance estimation library used in "Improved Estimation and Interpretation of Correlations in Neural Circuits."
Language:Matlab4 16 44
dbbak
MySQL database backup scripting
Language:Shell1 1 05
ephys-preprocessing
Pre-processing (LFP extraction, spike detection etc.) for electrophysiology data
Language:MATLAB3 6 00
FPGAEyeTracker
FPGA EyeTracker
Language:LabVIEW4 15 23
hdf5matlab
Library for manipulating neural data files generated in our lab
Language:MATLAB1 10 116
neuropixel-pipeline
Schemata and libraries for ingesting and clustering Neuropixel data
Language:Python4 1 02
scanreader
Python TIFF Stack Reader for ScanImage 5 scans (including multiROI).
Language:Python9 4 1011

Tolias Lab's Repositories

atlab/scanreader
Python TIFF Stack Reader for ScanImage 5 scans (including multiROI).
Language:Python9 4 1011
atlab/cov-est
Covariance estimation library used in "Improved Estimation and Interpretation of Correlations in Neural Circuits."
Language:Matlab4 16 44
atlab/FPGAEyeTracker
FPGA EyeTracker
Language:LabVIEW4 15 23
atlab/neuropixel-pipeline
Schemata and libraries for ingesting and clustering Neuropixel data
Language:Python4 1 02
atlab/atflow
TensorFlow library for Andreas Tolias lab
Language:Python2 4 32
atlab/attorch
PyTorch Utilities
Language:Python2 10 114
atlab/CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
Language:Jupyter Notebook1 0 00
atlab/commons
DataJoint schemas for neuroscience data
Language:MATLAB1 13 028
atlab/dbbak
MySQL database backup scripting
Language:Shell1 1 05
atlab/seq
Gene sequencing pipeline
Language:Jupyter Notebook1 3 03
atlab/nacllab
Vagrant+ubuntu+salt+zabbix+mysql testbed for administrative testing
Language:SaltStack0 1 00
atlab/at-pyutils
lab-wide python utilities
2 02
atlab/datajoint-matlab
High-level relational database interface for MATLAB
Language:Matlab15 0
atlab/datajoint-python
Relational data pipelines for the science lab
Language:Python0 04
atlab/dbms
mysql database managment utilities
Language:Shell1 0
atlab/docker
Docker Files
Language:Dockerfile3 03
atlab/dy-thesis
Dimitri Yatsenko's Thesis
Language:TeX12 01
atlab/fast-von-mises
Fast Von Mises fit
Language:Jupyter Notebook12 0
atlab/gpu-deploy
Fabric library for Docker GPU deployment
Language:Python2 03
atlab/Laser
Laster master program
Language:LabVIEW4 0
atlab/matlab-utils
Matlab utility code library
Language:Matlab13 02
atlab/mysql-admin-notes
MySQL Administration Notes
Language:Python1 02
atlab/PatchViewer
Slice imaging program for patching
Language:LabVIEW2 0
atlab/percona-monitoring-plugins
Percona Monitoring Plugins
Language:PHP1 0
atlab/PyMouse
Behavioral conditioning with mice
Language:Python4 03
atlab/pytorch-docker
Docker image for Pytorch
Language:Dockerfile2 0
atlab/sessions
Core DataJoint schemas for experimental sessions
Language:Matlab12 85
atlab/tuna
Python library for stimulus tuning.
Language:Jupyter Notebook6 04
atlab/zabbix-disk-performance
Zabbix template for collecting IO statistics
Language:Python1 0
atlab/zabbix-nvidia-smi-multi-gpu
A zabbix template using nvidia-smi. Works with multiple GPUs on Windows and Linux.
Language:Batchfile1 0