Cell Segmentation
Introduction
This project aims at performing automated identification of cell boundaries from the pathological video data.
We are given the video file cells.avi
as input.
Compatibility
- This code has been tested on Ubuntu 16.04 LTS and Windows 10
- Dependencies - Python 2.7 & 3.5,OpenCV 3.0+
Methods Used
- Image Processing followed by Contours
- Adaptive Thresholding
- Watershed Algorithm
- Structured Forest Algorithm
Results
The video edge.avi
is the result after applying Structured Forest algorithm.
References
Our Structured Forest is an implementation of Artanis CV python implementation.
Disclaimer
This software is published for academic and non-commerical use only.