Pinned Repositories
breastcancer-hypoxia
cv
My CV built using RMarkdown and the pagedown package.
cvmfs-singularity-sync
Scripts to synchronize Singularity images to a CVMFS repository.
Distilled-Sensing
domino2
A software package for connecting cell level features in single cell RNA sequencing data with receptor ligand activity.
DS
dyngen
Simulating single-cell data using gene regulatory networks 📠
obsidian-workflow-template
This is an Obsidian vault template from my Workflow with Tasks and Project Management, Journaling, Workout Logging, Media Tracking, Offline Read-it-later and Bookmark Management, Note-taking and Note-sharing on Your Own Website
pdfs
Technically-oriented PDF Collection (Papers, Specs, Decks, Manuals, etc)
SpaceMarkers
An R/Bioconductor software tool to identify genes associated with latent space interactions in spatial transcriptomics.
atuldeshpande's Repositories
atuldeshpande/SpaceMarkers
An R/Bioconductor software tool to identify genes associated with latent space interactions in spatial transcriptomics.
atuldeshpande/breastcancer-hypoxia
atuldeshpande/cv
My CV built using RMarkdown and the pagedown package.
atuldeshpande/cvmfs-singularity-sync
Scripts to synchronize Singularity images to a CVMFS repository.
atuldeshpande/Distilled-Sensing
atuldeshpande/domino2
A software package for connecting cell level features in single cell RNA sequencing data with receptor ligand activity.
atuldeshpande/DS
atuldeshpande/dyngen
Simulating single-cell data using gene regulatory networks 📠
atuldeshpande/obsidian-workflow-template
This is an Obsidian vault template from my Workflow with Tasks and Project Management, Journaling, Workout Logging, Media Tracking, Offline Read-it-later and Bookmark Management, Note-taking and Note-sharing on Your Own Website
atuldeshpande/pdfs
Technically-oriented PDF Collection (Papers, Specs, Decks, Manuals, etc)
atuldeshpande/reviews
Writing reviews of academic papers
atuldeshpande/RNS_Thesis
PhD dissertation
atuldeshpande/scatterHatch
atuldeshpande/simBM
atuldeshpande/singularity
Singularity: Application containers for Linux
atuldeshpande/SpaGCN
SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network
atuldeshpande/TestRepo
atuldeshpande/whitePaper
Manubot for white paper