aubreybailey

Pinned Repositories

afterQIIME
Language:R1 1 00
BBMap
(Not Offical) BBMap short read aligner, and other bioinformatic tools.
Language:Java0 1 00
docker-chromium-armhf
A docker container to provide an armhf chromium instance with widevine installed in it (allows Spotify, Netflix, etc.)
Language:JavaScript0 0 00
fq_utils
Bundle of scripts to manage fastq/fasta files
Language:Python0 1 00
FVE-novel
Language:Java0 0 00
gatk4-exome-analysis-pipeline
This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and Indel discovery in human exome sequencing data.
Language:WDL0 0 00
igv.js-flask
Example project for integrating igv.js and flask
Language:CSS0 1 00
microbiomeGWAS
Language:R0 1 00
qiime
Quantitative Insights Into Microbial Ecology (QIIME): Official repository for software and unit tests
Language:Python0 1 00
qiime-deploy-conf
configuration files to be used with the qiime-deploy packages
0 1 00

aubreybailey's Repositories

aubreybailey/afterQIIME
Language:R1 1 00
aubreybailey/BBMap
(Not Offical) BBMap short read aligner, and other bioinformatic tools.
Language:Java0 1 00
aubreybailey/docker-chromium-armhf
A docker container to provide an armhf chromium instance with widevine installed in it (allows Spotify, Netflix, etc.)
Language:JavaScript0 0 00
aubreybailey/fq_utils
Bundle of scripts to manage fastq/fasta files
Language:Python0 1 00
aubreybailey/FVE-novel
Language:Java0 0 00
aubreybailey/gatk4-exome-analysis-pipeline
This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and Indel discovery in human exome sequencing data.
Language:WDL0 0 00
aubreybailey/igv.js-flask
Example project for integrating igv.js and flask
Language:CSS0 1 00
aubreybailey/microbiomeGWAS
Language:R0 1 00
aubreybailey/qiime
Quantitative Insights Into Microbial Ecology (QIIME): Official repository for software and unit tests
Language:Python0 1 00
aubreybailey/qiime-deploy-conf
configuration files to be used with the qiime-deploy packages
0 1 00
aubreybailey/qiimer
Quantitative Insights Into Microbial Ecology - parsing and plotting functions for R
Language:R1 0
aubreybailey/simple16S
replicates matter!
Language:Shell1 0
aubreybailey/stan-cmdstanr-docker
A Docker image to run Stan, cmdstanr, and brms for Bayesian statistical modelling
Language:Dockerfile0 0
aubreybailey/synology-data-scrubbing
Language:Shell1 0
aubreybailey/TS
Torrent Suite
Language:Python1 0
aubreybailey/usedist
Functions for distance matrix objects in R.
Language:R1 0