/renkulab-docker

Jupyter images used by the Renku platform

Primary LanguageDockerfileApache License 2.0Apache-2.0

Build Status pullreminders

Renku Jupyter images

This repository contains the Dockerfiles to build Jupyter notebook images & other interactive environments to use with the Renku platform. These images contain minimal dependencies as well as a verison of renku-python. https://hub.docker.com/r/renku/renkulab/tags

Building

Build with Docker by running docker build -t <name:tag> . in the directory of the image you would like to build.

Current images

py3.7

The basic Jupyter image with minimal dependencies.

Currently with python 3.7.

r3.6.1

Based on the rocker docker image: https://github.com/rocker-org/binder, chosen because rocker keeps a more up-to-date version of R than conda. Includes the R Jupyter kernel as well as RStudio. To access RStudio, simply replace /lab or /tree with /rstudio in the URL.

Currently with R 3.6.1.

bioc3_10

Based on the bioconductor docker image: https://github.com/Bioconductor/bioconductor_docker.

Currently with bioconductor 3_10.

cuda9.2

Based on the basic jupyter image with CUDA 9.2 installed.

cuda10.0-tf1.14

Based on the basic jupyter image with CUDA 10.0 and Tensorflow 1.14 installed.