Pinned Repositories
hack-cambridge
Winning solution of Improbable's special prize at Hack Cambridge 2019.
acl-anthology
Data and software for building the ACL Anthology.
Analyze-CRISPR-Features
Some of the notebooks wrote during the work on my MSc project, to analyze features for CRISPR gRNA efficiency predictions.
avaspataru
avaspataru.github.io
BamCleave
Working to extend software which splits bam files by cells, to split by groups of cells.
CRISPR-Analyzer
A web application which helps us investigate the importance of features in ML-based tools for CRISPR/Cas9 gRNA efficiency prediction. This was developed as part of an MSc project in 2020.
datathon
Citadel DataOpen datathon: Analysis of the 2012 London Olympic Games
PLAsTiCC-Astronomical-Classification
Submission for Kaggle Competition to classify astronomical objects based on features picked up by the Large Synoptic Survey Telescope (LSST).
SHAP-Value-Plotting-for-CRISPR-tools
MSc Thesis Project. This project is producing SHAP summary plots (and other plots) for the features of some CRISPR sgRNA design tools when ran on different datasets.
avaspataru's Repositories
avaspataru/datathon
Citadel DataOpen datathon: Analysis of the 2012 London Olympic Games
avaspataru/acl-anthology
Data and software for building the ACL Anthology.
avaspataru/Analyze-CRISPR-Features
Some of the notebooks wrote during the work on my MSc project, to analyze features for CRISPR gRNA efficiency predictions.
avaspataru/avaspataru
avaspataru/avaspataru.github.io
avaspataru/BamCleave
Working to extend software which splits bam files by cells, to split by groups of cells.
avaspataru/ClusterInsight
Application which automatically generates a report for explaining the classification of cells from a DGE matrix, made via Seurat.
avaspataru/CRISPR-Analyzer
A web application which helps us investigate the importance of features in ML-based tools for CRISPR/Cas9 gRNA efficiency prediction. This was developed as part of an MSc project in 2020.
avaspataru/hackcambridge101
Glance. Enter a regex expression and find semantically similar code snippets from popular OSS projects.
avaspataru/PLAsTiCC-Astronomical-Classification
Submission for Kaggle Competition to classify astronomical objects based on features picked up by the Large Synoptic Survey Telescope (LSST).
avaspataru/SHAP-Value-Plotting-for-CRISPR-tools
MSc Thesis Project. This project is producing SHAP summary plots (and other plots) for the features of some CRISPR sgRNA design tools when ran on different datasets.
avaspataru/CS311-Neural-Computing
Implementation of an MLP (Multi-layer perceptron) which would learn how to solve the XOR problem.
avaspataru/Dissertation
Analysis of Ovarian Cancer Single-cell RNA-seq data
avaspataru/FActScore
A package to evaluate factuality of long-form generation. Original implementation of our EMNLP 2023 paper "FActScore: Fine-grained Atomic Evaluation of Factual Precision in Long Form Text Generation"
avaspataru/Tic-Tac-Toe
Microsoft Summer School Project. A 3D version of the Tic-Tac-Toe game in Unity.