awchrist

CovGen

Creates a target specific exome_full192.coverage.txt file required by MutSig

coyote

jetstream

Workflow management system written as a pure Python package and command-line utility. It supports complex workflows modeled as directed- acyclic graphs (DAGs), and execution on batch schedulers

jetstream_resources

Collection of scripts and README files tracking the source and generation of reference genomes and annotation files

MMRF_CoMMpass

A collection of scripts used to recreate files and graphs used in the MMRF CoMMpass analysis.

phoenix

Jetstream compatible workflow template supporting comprehensive analysis of human sequencing data against GRCh38

Post_Medusa_Processing

snpSniffer

Tool for checking genotype concordance between multiple assays

awchrist/supra

Code for benchmarking Supra upgrades