aweimann
Hi there! I'm Aaron, a computational biologist with a passion for programming in R and Python. I love using data to uncover insights and solve problems.
aweimann's Stars
buzbarstow/kosudoku
ProSolo/prosolo
ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.
evolbioinfo/pastml
Ancestral character reconstruction and visualisation for rooted phylogenetic trees
gtonkinhill/panaroo
An updated pipeline for pangenome investigation
bioFAM/MOFA
Multi-Omics Factor Analysis
dariober/ASCIIGenome
Text Only Genome Viewer!
pauldmccarthy/indexed_gzip
Fast random access of gzip files in Python
thackl/minidot
Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2
PROBIC/mSWEEP
mSWEEP High-resolution sweep metagenomics using fast probabilistic inference
seandavi/awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
tdpetrou/Learn-Pandas
Tutorials on how to use pandas effectively to do data analysis
kevlar-dev/kevlar
Reference-free variant discovery in large eukaryotic genomes
bogemad/marker_gene_phylogeny
Runs phylosift to generate a marker gene phylogeny, useful for intra-genus comparisons.
hzi-bifo/traitar
From genomes to phenotypes: Traitar, the microbial trait analyzer
quinlan-lab/applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2020
ToniWestbrook/paladin
Protein Alignment and Detection Interface
aldro61/kover
Learn interpretable computational phenotyping models from k-merized genomic data
DReichLab/EIG
Eigen tools by Nick Patterson and Alkes Price lab
xapple/seqenv
Assign environment ontology (EnvO) terms to DNA sequences