aymanekricha
Ph.D. Scholar in Cancer Immunotheapy Passionate about Clinical Data Sciences, AI, Machine learning
Morocco
Pinned Repositories
ATHENA
awesome-bioinformatics-tools
Awesome bioinformatics tools
awesome-datascience
:memo: An awesome Data Science repository to learn and apply for real world problems.
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Capybara
Capybara: A computational tool to measure cell identity and fate transitions
Compass
In-Silico Modeling of Metabolic Heterogeneity using Single-Cell Transcriptomes
DiaNN
DIA-NN - a universal automated software suite for DIA proteomics data analysis.
gsam
gsam
M1_M2_MacrophageGEMs
Genome-scale Metabolic Modeling of CRC-associated Macrophage subtypes
scREMOTE
scREMOTE: a single cell REprogramming Model Through CREs
aymanekricha's Repositories
aymanekricha/ATHENA
aymanekricha/awesome-bioinformatics-tools
Awesome bioinformatics tools
aymanekricha/awesome-datascience
:memo: An awesome Data Science repository to learn and apply for real world problems.
aymanekricha/awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
aymanekricha/Compass
In-Silico Modeling of Metabolic Heterogeneity using Single-Cell Transcriptomes
aymanekricha/gsam
gsam
aymanekricha/M1_M2_MacrophageGEMs
Genome-scale Metabolic Modeling of CRC-associated Macrophage subtypes
aymanekricha/biodatascience
This is the web resource for NTU's Bio-Data Science and Education Laboratory
aymanekricha/COBRA.tutorials
Repository of tutorials for The COBRA Toolbox
aymanekricha/community-platform
A platform to build useful communities that aim to tackle global problems
aymanekricha/compairr
Comparison of Adaptive Immune Receptor Repertoires
aymanekricha/cs-video-courses
List of Computer Science courses with video lectures.
aymanekricha/Data-science
Collection of useful data science topics along with code and articles
aymanekricha/Data-science-best-resources
Carefully curated resource links for data science in one place
aymanekricha/DataScienceResources
Open Source Data Science Resources.
aymanekricha/FriendsDontLetFriends
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
aymanekricha/functional_enrichment_analysis
A DIY guide to gene ontology, pathway, and gene set enrichment analysis
aymanekricha/GenePT
aymanekricha/gRNA-Design-for-CRISPR-Cas9
A Python-based tool for designing and evaluating gRNAs for CRISPR-Cas9 gene editing.
aymanekricha/harmony
Fast, sensitive and accurate integration of single-cell data with Harmony
aymanekricha/learn-python
📚 Playground and cheatsheet for learning Python. Collection of Python scripts that are split by topics and contain code examples with explanations.
aymanekricha/LightGBM_Machine_Learning_Peptide_Screening
Repository for paper: Accelerating the Screening of Small Peptide Ligands by Combining Peptide-Protein Docking and Machine Learning"
aymanekricha/Magellan
aymanekricha/Pluto.jl
🎈 Simple reactive notebooks for Julia
aymanekricha/Python
All Algorithms implemented in Python
aymanekricha/RNA-seq-pipeline
RNA-seq pipeline for a specific FastQ file, using a Docker profile
aymanekricha/SCP
An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.
aymanekricha/STAR
RNA-seq aligner
aymanekricha/VoltRon
VoltRon: spatial omic analysis toolbox for multiomic integration using image registration
aymanekricha/YouTubeTutorials