/delirium

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delirium

This repository contains code to generate the results reported in Development and Validation of an Electronic Health Record-Based Machine Learning Model to Estimate Delirium Risk in Newly Hospitalized Patients.

The data have been redacted due to HIPAA requirements, but model training and validation are reported in caret_tuning.R.

The models reported in the manuscript are in /rda/models. They are named with the suffix _nudesc1 if the outcome was calculated using Nu-DESC≥1, else they correspond to the outcome calculated using Nu-DESC≥2.

To generate ROC curves and confusion matrices reported in the paper, run:

Rscript -e "rmarkdown::render('caret_analysis.Rmd')"

The results of this command are in caret_analysis.html

DOI