ayushnoori
Researching AI for neuroscience to improve human health.
@mims-harvard @churchlab @mindds @serrano-pozo-labCambridge, MA
Pinned Repositories
alphafold-tracker
Tracking publications on AlphaFold 2 and its applications.
amanuensis
AI-enabled physician assistant for automated clinical summarization and question generation. Empowering physicians to achieve accurate diagnoses and effective treatments.
brainstorm
Personal utility functions.
datalens
Open data analysis platform for Alzheimer's disease. Created for CS50 at Harvard College.
Drug_Explorer
Interactive & explainable GNN for drug repurposing
metapaths
Similarity search in heterogeneous knowledge graphs using meta paths.
molecule-synthesis
Multi-objective generative AI for designing novel brain-targeting small molecules.
nd-diff-expr
Differential gene expression data from the human central nervous system across Alzheimer’s disease, Lewy body diseases, and ALS-FTD.
scCIPHER
scCIPHER: Contextual deep learning on single-cell-enriched knowledge graphs in neurological disorders
glia-ihc
Cyclic multiplex fluorescent immunohistochemistry and machine learning reveal distinct states of astrocytes and microglia in normal aging and Alzheimer’s disease.
ayushnoori's Repositories
ayushnoori/metapaths
Similarity search in heterogeneous knowledge graphs using meta paths.
ayushnoori/amanuensis
AI-enabled physician assistant for automated clinical summarization and question generation. Empowering physicians to achieve accurate diagnoses and effective treatments.
ayushnoori/molecule-synthesis
Multi-objective generative AI for designing novel brain-targeting small molecules.
ayushnoori/datalens
Open data analysis platform for Alzheimer's disease. Created for CS50 at Harvard College.
ayushnoori/alphafold-tracker
Tracking publications on AlphaFold 2 and its applications.
ayushnoori/brainstorm
Personal utility functions.
ayushnoori/Drug_Explorer
Interactive & explainable GNN for drug repurposing
ayushnoori/PrimeKG
Precision Medicine Knowledge Graph (PrimeKG)
ayushnoori/program-synthesis
Bottom-up enumerative program synthesis for CS252R at Harvard.
ayushnoori/ps2-lab
Lab final project for PHYSCI 2 at Harvard College.
ayushnoori/synthea
Synthetic Patient Population Simulator
ayushnoori/ai-biomedicine-workshop
Artificial intelligence for biomedicine workshop at the Future of Synthetic Biology Conference 2023 (www.futureofsynbio.org), hosted by the Harvard College OpenBio Laboratory (www.harvardopenbio.org).
ayushnoori/ayushnoori
Personal repository with my README.
ayushnoori/al-folio
A beautiful, simple, clean, and responsive Jekyll theme for academics
ayushnoori/alive
Advanced Lifespan Intelligence Virtual Expert (ALIVE). Placing control over your healthspan into your own hands. Built for TreeHacks 2024.
ayushnoori/ayushnoori.github.io
Personal website.
ayushnoori/BioGPT
ayushnoori/ccc-scheduling
Scheduling for CCC-BIDMC clinic.
ayushnoori/cs181-textbook
ayushnoori/cs271-presentation
CS271 presentation on variability overweighting in line graphs.
ayushnoori/dgl
Python package built to ease deep learning on graph, on top of existing DL frameworks.
ayushnoori/drug_id_mapping
Cross matching drugs from different databases ( Drugbank, STITCH, ChEMBL PubChem, UMLS, TTD, KEGG, ZINC ) and saving in a structured TSV file.
ayushnoori/graph-bbb
Graph molecular learning to predict blood-brain-barrier penetration and CNS drug delivery.
ayushnoori/KG_RAG
This repository holds the scripts that implement Knowledge Graph based Retrieval-Augmented Generation for Large Language Models
ayushnoori/openbio
Website for Harvard OpenBio Project.
ayushnoori/rl-simulation
Simulating epsilon-greedy and temporal difference reinforcement learning algorithms.
ayushnoori/SHEPHERD
SHEPHERD: Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases
ayushnoori/spring2023
GENED 1125 at Harvard College.
ayushnoori/TDC
Therapeutics Data Commons: Artificial Intelligence Foundation for Therapeutic Science
ayushnoori/xgboost
Scalable, Portable and Distributed Gradient Boosting (GBDT, GBRT or GBM) Library, for Python, R, Java, Scala, C++ and more. Runs on single machine, Hadoop, Spark, Dask, Flink and DataFlow