b-niu

Pinned Repositories

avocado
Language:R00
avocadopy
Language:Python0 1 00
b-niu.github.io
0 1 00
BIOBSS
A package for processing signals recorded using wearable sensors, such as Electrocardiogram (ECG), Photoplethysmogram (PPG), Electrodermal activity (EDA) and 3-axis acceleration (ACC).
Language:Python0 0 00
BioinformaticsScripts
Bioinformatics scripts for NGS analysis.
Language:Shell0 1 01
chimeraviz
chimeraviz is an R package that automates the creation of chimeric RNA visualizations.
Language:R0 0 00
ChromosomeMappings
This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.
0 0 00
EstimateClonality
Forked from https://bitbucket.org/nmcgranahan/pancancerclonality/src/master/.
Language:R5 1 12
Fusion
Language:Shell1 0 00
yolo2coco
A tool for converting YOLO instance segmentation annotations to COCO format.
Language:Python1 1 00

b-niu's Repositories

b-niu/EstimateClonality
Forked from https://bitbucket.org/nmcgranahan/pancancerclonality/src/master/.
Language:R5 1 12
b-niu/Fusion
Language:Shell1 0 00
b-niu/yolo2coco
A tool for converting YOLO instance segmentation annotations to COCO format.
Language:Python1 1 00
b-niu/avocado
Language:R00
b-niu/avocadopy
Language:Python0 1 00
b-niu/b-niu.github.io
0 1 00
b-niu/BIOBSS
A package for processing signals recorded using wearable sensors, such as Electrocardiogram (ECG), Photoplethysmogram (PPG), Electrodermal activity (EDA) and 3-axis acceleration (ACC).
Language:Python0 0 00
b-niu/BioinformaticsScripts
Bioinformatics scripts for NGS analysis.
Language:Shell0 1 01
b-niu/clonevol
Inferring and visualizing clonal evolution in multi-sample cancer sequencing
Language:R0 1 00
b-niu/DNA-seq-analysis
DNA sequencing analysis notes from Ming Tang
Language:Shell0 0
b-niu/docker-bam_readcount_helper-cwl
Language:Python0 0
b-niu/docker-citup
Language:Dockerfile1 0
b-niu/docker-pysamstats
1 0
b-niu/gistic2
Genomic Identification of Significant Targets in Cancer (GISTIC), version 2
Language:MATLAB0 0
b-niu/HLAscan
0 0
b-niu/learningML
学习机器学习
Language:Jupyter Notebook0 0
b-niu/License
1 0
b-niu/LittleTricks
Language:Shell0 0
b-niu/machine-learning
Language:Python1 0
b-niu/MacOS
0 0
b-niu/maftools
Summarize, Analyze and Visualize MAF files from TCGA or in house studies.
Language:R
b-niu/mapscape
Visualization tool for spatial clonal evolution.
Language:JavaScript0 0
b-niu/neoantigens
🏺 Exploring novel tumor epitope identification
Language:Python0 0
b-niu/ngs-pipeline
Language:Shell1 0
b-niu/phylowgs
Application for inferring subclonal composition and evolution from whole-genome sequencing data.
Language:Python0 0
b-niu/PVAN
b-niu/radcap
Software for processing data from RADcap
Language:Python0 0
b-niu/sv-cnv-studies
:books: Relevant papers for CNV and SV approaches
0 0
b-niu/timescape
Visualization tool for temporal clonal evolution.
Language:JavaScript0 0
b-niu/vcf2phylip
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
Language:Python0 0